Author

J. Herbert

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Evolutionary Biology· 2 Ecology· 1 Immunology· 1

Signature Assays, Organisms & Methods

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Approach:experimental assay· 2 Organism:bacteria (other)· 1 Research Focus:benchmarking· 1 Assay:bulk RNA-seq· 1 Research Focus:chromatin & epigenetic regulation· 1 Approach:comparative / phylogenetic analysis· 1 Assay:DNA methylation· 1 Research Focus:ecology & biodiversity· 1

Frequent Co-Authors

A. J. Balmer· 2 shared A. S. M. M. Hossain· 2 shared A. W. Tucker· 2 shared L. A. Weinert· 2 shared M. Gottschalk· 2 shared M. Matuszewska· 2 shared S. Bruchmann· 2 shared A. Z. Moe· 1 shared

Activity by Year

2019-2023 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 35 mutual co-author links

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2 shared papersEvolutionary Biology

A. J. Balmer

Mutual co-authors in cluster

Author profile →

4 papers

Recent·Most cited

The emergence and diversification of a zoonotic pathogen from within the microbiota of intensively farmed pigs

G. G. R. Murray, A. S. M. M. Hossain, E. L. Miller, S. Bruchmann, A. J. Balmer, M. Matuszewska, J. Herbert, N. F. Hadjirin, R. Mugabi, G. Li, M. L. Ferrando, I. M. Fernades de Oliveira, T. Nguyen, P. L. K. Yen, H. D. Phuc, , L. A. Weinert

This study traces the emergence and spread of Streptococcus suis pathogens in pigs, linking their evolution to changes in farming practices and identifying genomic factors associated with pathogenicity.

bioRxiv · May 17, 2023Evolutionary Biology

An introduction to predictive distribution modelling for conservation to welcome novel perspectives

M. MacPherson, K. R. Burgio, M. DeSaix, B. Freeman, J. Herbert, R. Herman, V. Jirinec, J. Shonfield, D. Slager, C. van Rees, J. Jankowski

This paper introduces predictive distribution modeling for conservation, focusing on improving species distribution models to address challenges in spatial and temporal resolution and inform conservation strategies.

bioRxiv · May 26, 2021Ecology

Mutation rate dynamics reflect ecological change in an emerging zoonotic pathogen

G. Murray, A. J. Balmer, J. Herbert, N. F. Hadijirn, C. L. Kemp, M. Matuszewska, S. Bruchmann, A. S. M. M. Hossain, M. Gottschalk, A. W. Tucker, E. Miller, L. A. Weinert

The paper investigates how mutation rates in Streptococcus suis change with ecology and genome size, finding higher mutation rates in invasive disease isolates and a bias towards G/C to A/T mutations in more pathogenic strains.

bioRxiv · Apr 12, 2021Evolutionary Biology

Neutrophil: Airway Epithelial Interactions Result in Increased Epithelial Damage and Viral Clearance during RSV Infection

Y. Deng, J. Herbert, E. Robinson, L. Ren, R. Smyth, C. M. Smith

This study shows that neutrophils enhance RSV clearance but increase airway epithelial damage through mechanisms involving activation, degranulation, and apoptosis.

bioRxiv · Dec 20, 2019Immunology