Author

M. Farmer

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Ecology· 1 Microbiology· 1

Signature Assays, Organisms & Methods

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Assay:metagenomics· 2 Approach:experimental assay· 1 Research Focus:gene regulatory network inference· 1 Research Focus:host-pathogen & immune response· 1 Assay:metabolomics· 1 Organism:mouse· 1 Approach:statistical model· 1

Frequent Co-Authors

A. Franke· 1 shared A. Viswanathan· 1 shared B. Ngo· 1 shared B. Schnabl· 1 shared C. Bang· 1 shared C. Schramm· 1 shared G. Wells· 1 shared H. Francis· 1 shared

Activity by Year

2021-2023 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 36 mutual co-author links

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1 shared paperMicrobiology

A. Franke

Mutual co-authors in cluster

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2 papers

Recent·Most cited

Meta-omic profiling reveals ubiquity of genes encoding for the high value nitrogen rich biopolymer cyanophycin in activated sludge microbiomes

M. Farmer, R. Raj, W. Tarpeh, K. Tyo, G. Wells

The paper identifies the ubiquity of the cyanophycin synthesis gene cphA in activated sludge microbiomes, suggesting potential for simultaneous nitrogen and phosphorus recovery.

bioRxiv · Aug 22, 2023Ecology

Protective and aggressive bacterial subsets and metabolites modify hepatobiliary inflammation and fibrosis in PSC.

M. Awoniyi, J. Wang, B. Ngo, V. Meadows, J. Tam, A. Viswanathan, Y. Lai, S. Montgomery, M. Farmer, M. Kummen, L. B. Thingholm, C. Schramm, C. Bang, A. Franke, B. Schnabl, , R. B. Sartor

This study identifies protective and aggressive bacterial subsets and metabolites in PSC patients and mice, showing their impact on hepatobiliary inflammation and fibrosis.

bioRxiv · Oct 31, 2021 · PreprintMicrobiology