Author

M. P. Viana

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Cell Biology· 4

Signature Assays, Organisms & Methods

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Research Focus:cell type annotation· 4 Organism:human· 3 Research Focus:clustering· 2 Approach:deep learning· 2 Approach:statistical model· 2 Approach:benchmark study· 1 Research Focus:cell signaling & trafficking· 1 Research Focus:dimensionality reduction· 1

Frequent Co-Authors

M. C. Hendershott· 3 shared S. M. Rafelski· 3 shared C. Yan· 2 shared G. R. Johnson· 2 shared J. Chen· 2 shared J. L. Gehring· 2 shared K. A. Gerbin· 2 shared K. R. Cordes Metzler· 2 shared

Activity by Year

2019-2020 · peak 3/yr

Co-Author Collaboration Network

10 top collaborators · 45 mutual co-author links

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3 shared papersCell Biology

M. C. Hendershott

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Author profile →

4 papers

Recent·Most cited

Cell BiologybioRxivPreprintDec 13, 2020

The Allen Cell and Structure Segmenter: a new open source toolkit for segmenting 3D intracellular structures in fluorescence microscopy images

J. Chen, L. Ding, M. P. Viana…·S. M. Rafelski

The paper introduces the Allen Cell and Structure Segmenter, an open-source toolkit for 3D segmentation of intracellular structures in fluorescence microscopy images, achieving high accuracy through classic and deep learning workflows.

DOI 10.1101/491035

humanfluorescence / live-cell microscopy

𝕏 PostBluesky

Cell BiologybioRxivPreprintDec 8, 2020

Robust integrated intracellular organization of the human iPS cell: where, how much, and how variable

M. P. Viana, J. Chen, T. A. Knijnenburg…·Leung

The paper establishes quantitative rules for the locations, amounts, and variation of 25 cellular structures in human iPSCs using high-resolution imaging and analysis.

DOI 10.1101/2020.12.08.415562

humanimaging

𝕏 PostBluesky

Cell BiologybioRxivMay 26, 2020

Cell states beyond transcriptomics: integrating structural organization and gene expression in hiPSC-derived cardiomyocytes

K. A. Gerbin, T. Grancharova, R. Donovan-Maiye…·R. N. Gunawardane

The paper integrates gene expression and sarcomere organization in hiPSC-derived cardiomyocytes to predict subcellular states and reveal correlations between transcript abundance and structural patterns.

DOI 10.1016/j.cels.2021.05.001

humanscRNA-seq

𝕏 PostBluesky

Cell BiologybioRxivOct 10, 2019

Mitochondrial volume fraction and translation speed impact mRNA localization and production of nuclear-encoded mitochondrial proteins

T. Tsuboi, M. P. Viana, F. Xu…·B. M. Zid

DOI 10.7554/elife.57814

yeastmetabolomics

𝕏 PostBluesky