Author

M. Prete

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Immunology· 3 Cell Biology· 1

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Research Focus:cell type annotation· 4 Organism:human· 4 Approach:deep learning· 3 Assay:scRNA-seq· 3 Assay:spatial transcriptomics· 3 Approach:statistical model· 3 Research Focus:clustering· 2 Research Focus:differential expression· 2

Frequent Co-Authors

K. Polanski· 3 shared S. A. Teichmann· 3 shared C. Dominguez Conde· 2 shared C. Suo· 2 shared C. Xu· 2 shared E. Dann· 2 shared E. Stephenson· 2 shared E. Tuck· 2 shared

Activity by Year

2021-2023 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 45 mutual co-author links

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3 shared papersImmunology

K. Polanski

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Author profile →

4 papers

Recent·Most cited

A spatial human thymus cell atlas mapped to a continuous tissue axis

N. Yayon, V. R. Kedlian, L. Boehme, C. Suo, B. Wachter, R. T. Beuschel, O. Amsalem, K. Polanski, S. Koplev, E. Tuck, E. Dann, J. Van Hulle, S. Perera, T. Putteman, A. V. Predeus, , Tag

The paper maps the spatial organization of the human thymus across developmental stages using a multimodal atlas and identifies key cellular and molecular features of T cell development.

bioRxiv · Oct 25, 2023Immunology

Multi-scale spatial mapping of cell populations across anatomical sites in healthy human skin and basal cell carcinoma

C. Ganier, P. Mazin, G. Herrera-Oropeza, X. Du-Harpur, M. Blakeley, J. Gabriel, A. Predeus, B. Cakir, M. Prete, N. Harun, J.-F. Darrigrand, A. Haiser, S. Wyles, T. J. Shaw, S. A. Teichmann, , M. D. Lynch

The paper creates a multi-scale spatial atlas of healthy human skin and basal cell carcinoma using various omics and imaging techniques, revealing cell population localization and origins.

bioRxiv · Aug 8, 2023 · PreprintCell Biology

Mapping the developing human immune system across organs

C. Suo, E. Dann, I. Goh, L. Jardine, V. Kleshchevnikov, J.-E. Park, R. A. Botting, E. Stephenson, J. Engelbert, Z. K. Tuong, K. Polanski, N. Yayon, C. Xu, O. Suchanek, R. Elmentaite, , S. A. Teichmann

This study maps the developing human immune system across organs using single-cell RNA sequencing, antigen-receptor sequencing, and spatial transcriptomics, revealing cross-gestation and cross-organ variability and identifying prenatal B1 cells and unconventional T cell origins.

bioRxiv · Jan 17, 2022Immunology

Cross-tissue immune cell analysis reveals tissue-specific adaptations and clonal architecture across the human body

C. Dominguez Conde, T. Gomes, L. B. Jarvis, C. Xu, S. Howlett, D. Rainbow, O. Suchanek, H. King, L. Mamanova, K. Polanski, N. Huang, E. Fasouli, K. Mahbubani, M. Prete, E. Tuck, , S. A. Teichmann

The paper analyzes immune cell diversity across 15 human tissues using single-cell RNA sequencing and VDJ sequencing, revealing tissue-specific features and clonal architecture of T and B cells.

bioRxiv · Apr 28, 2021Immunology