Author

R. Stevens

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Biophysics· 2 Microbiology· 1 Plant Biology· 1

Signature Assays, Organisms & Methods

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Approach:deep learning· 2 Assay:bulk RNA-seq· 1 Assay:cryo-EM· 1 Research Focus:drug response / drug discovery· 1 Research Focus:eQTL / molecular QTL mapping· 1 Approach:experimental assay· 1 Organism:human· 1 Approach:mechanistic / dynamical model· 1

Frequent Co-Authors

A. Brace· 2 shared A. Ramanathan· 2 shared A. Trifan· 2 shared H. Ma· 2 shared I. Foster· 2 shared S. C. Chennubhotla· 2 shared Z. Li· 2 shared A. Anandkumar· 1 shared

Activity by Year

2021-2024 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 35 mutual co-author links

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2 shared papersBiophysics

A. Brace

Mutual co-authors in cluster

Author profile →

4 papers

Recent·Most cited

Characterization of a major QTL for sodium accumulation in tomato shoot

A. Hereil, M. Guillaume, R. Duboscq, Y. Carretero, E. Pelpoir, F. Bitton, C. Giraud, R. Karlova, C. Testerink, R. Stevens, M. Causse

The paper identifies a major QTL for sodium accumulation in tomato shoots under salt stress and links it to the expression of SlHKT1.2, a sodium transporter gene.

bioRxiv · May 21, 2024 · PreprintPlant Biology

A yeast love triangle: multiple hybridizations shape genome evolution in the Pichia cactophila species complex.

V. Mixao, E. Saus, F. Hagen, T. Boekhout, R. Stevens, T. Gabaldon

The paper sequenced and compared genomes of yeast species in the Pichia cactophila complex to show recurrent hybridizations and propose new species classifications.

bioRxiv · Dec 27, 2023 · PreprintMicrobiology

Intelligent Resolution: Integrating Cryo-EM with AI-driven Multi-resolution Simulations to Observe the SARS-CoV-2 Replication-Transcription Machinery in Action

A. Trifan, D. Gorgun, Z. Li, A. Brace, M. Zvyagin, H. Ma, A. R. Clyde, D. A. Clark, M. Salim, D. Hardy, T. Burnley, L. Huang, J. McCalpin, M. Emani, H. Yoo, , A. Ramanathan

This study develops an AI-driven multi-resolution simulation workflow to study SARS-CoV-2 RTC dynamics, combining cryo-EM with mesoscale simulations and AI methods.

bioRxiv · Oct 9, 2021 · PreprintBiophysics

High Throughput Virtual Screening and Validation of a SARS-CoV-2 Main Protease Non-Covalent Inhibitor

A. Clyde, S. Galanie, D. W. Kneller, H. Ma, Y. Babuji, B. Blaiszik, A. Brace, T. Brettin, K. Chard, R. Chard, L. Coates, I. Foster, D. Hauner, V. Kertesz, N. Kumar, , R. Stevens

This paper identifies a novel non-covalent inhibitor of SARS-CoV-2 main protease through high throughput virtual screening, validated by biochemical assays, X-ray crystallography, and molecular dynamics simulations.

bioRxiv · Mar 27, 2021 · PreprintBiophysics