Author

R. Winstead

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Evolutionary Biology· 2 Microbiology· 1

Signature Assays, Organisms & Methods

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Approach:statistical model· 3 Research Focus:cell type annotation· 1 Research Focus:chromatin & epigenetic regulation· 1 Assay:DNA methylation· 1 Organism:human· 1 Assay:metagenomics· 1 Research Focus:variant effect prediction· 1 Organism:virus· 1

Frequent Co-Authors

A. G. Lopez· 1 shared A. Jaberi· 1 shared A. K. Chemel· 1 shared A. Le· 1 shared A. Lopez· 1 shared A. Pradhananga· 1 shared A. R. Mahoney· 1 shared A. Shieh· 1 shared

Activity by Year

2019-2021 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 45 mutual co-author links

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1 shared paperEvolutionary Biology

A. G. Lopez

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Author profile →

3 papers

Recent·Most cited

ANME-1 archaea drive methane accumulation and removal in estuarine sediments

R. Kevorkian, S. Callahan, R. Winstead, K. G. Lloyd

This study shows ANME-1 archaea perform both methane oxidation and production in estuarine sediments, depending on environmental conditions.

Environmental Microbiology Reports · Jan 18, 2021Peer-reviewedMicrobiology

Assessing in vivo mutation frequencies and creating a high-resolution genome-wide map of fitness costs of Hepatitis C virus

K. H. Tisthammer, C. Solis, F. Oracles, M. Nzerem, R. Winstead, W. Dong, J. B. Joy, P. S. Pennings

This study estimates in vivo fitness costs of HCV mutations using frequency-based analysis across 195 patients, revealing mutation type and genomic location effects on fitness costs.

bioRxiv · Oct 1, 2020Evolutionary Biology

CpG-creating Mutations are Costly in Many Human Viruses

V. R. Caudill, S. Qin, R. Winstead, J. Kaur, K. Tisthammer, E. G. Pineda, O. Carja, R. M. Eggo., K. Koelle, K. Lythgoe, S. Roy, N. Allen, M. Aviles, B. A. Baker, W. Bauer, , Wint

The paper examines the cost of CpG-creating mutations in various human viruses using existing genomic data and finds they are generally costly.

bioRxiv · Jul 25, 2019Evolutionary Biology