Author

S. Ilic

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Biochemistry· 3 Microbiology· 2 Biophysics· 1 Scientific Communication & Education· 1

Signature Assays, Organisms & Methods

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Approach:experimental assay· 5 Organism:bacteria (other)· 3 Research Focus:differential expression· 2 Assay:DNA methylation· 2 Research Focus:drug response / drug discovery· 2 Assay:metagenomics· 2 Organism:mouse· 2 Approach:statistical model· 2

Frequent Co-Authors

B. Akabayov· 5 shared A. Afek· 2 shared A. Rodriguez-Palacios· 2 shared B. Tam· 2 shared M. Singh· 2 shared A. Ammar· 1 shared A. LaSalla· 1 shared A. Marsh· 1 shared

Activity by Year

2018-2024 · peak 3/yr

Co-Author Collaboration Network

10 top collaborators · 12 mutual co-author links

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5 shared papersBiochemistry

B. Akabayov

Mutual co-authors in cluster

Author profile →

7 papers

Recent·Most cited

Rodent Gut Bacteria Coexisting with an Insect Gut Virus in Parasitic Cysts: Metagenomic Evidence of Microbial Translocation and Co-adaptation in Spatially-Confined Niches

A. Ammar, V. Singh, S. Ilic, F. Samiksha, A. Marsh, A. Rodriguez-Palacios

This study identifies gut bacteria and an insect virus in parasitic cysts of vole mice, suggesting microbial translocation and adaptation in spatially confined environments.

bioRxiv · Mar 22, 2024 · PreprintMicrobiology

Cell-penetrating peptide conjugates of indole-3-acetic acid-based DNA primase/Gyrase inhibitors as potent antitubercular agents against planktonic and biofilm culture of Mycobacterium smegmatis

R. P. Dewangan, M. Singh, S. Ilic, B. Tam, B. Akabayov

bioRxiv · Dec 1, 2020Microbiology

Reconfiguring primase DNA-recognition sequences by using a data driven approach

A. Soffer, M. Ifrach, S. Ilic, A. Afek, H. Schussheim, D. Vilenchik, B. Akabayov

The paper uses a machine learning approach to analyze DNA-protein binding data and identifies DNA sequences recognized by T7 primase.

bioRxiv · Sep 29, 2020 · PreprintBiochemistry

Dual acting small-Molecule inhibitors targeting Mycobacterial DNA replication

M. Singh, S. Ilic, B. Tam, Y. Ben-Ishay, D. Sherf, D. Pappo, B. Akabayov

This study develops dual-acting small-molecule inhibitors targeting Mtb DNA replication enzymes DnaG primase and DNA gyrase, with improved physicochemical properties and inhibitory effects.

bioRxiv · Jun 3, 2020Biochemistry

Understanding artificial mouse-microbiome heterogeneity and six actionable themes to increase study power

A. R. Basson, A. LaSalla, G. Lam, D. Kulpins, E. L. Moen, M. Sundrud, J. Miyoshi, S. Ilic, B. R. Theriault, F. Cominelli, A. Rodriguez-Palacios

The paper identifies six actionable themes to reduce artificial heterogeneity in mouse-microbiome studies by addressing statistical and practical issues in housing density and data analysis.

bioRxiv · Sep 25, 2019Scientific Communication & Education

SIRT6 is a DNA double-strand break sensor

D. Toiber, L. Onn, G. Cleitman, S. Ilic, M. Portillo, D. Stein, Z. Slobodnik, S. Kaluski, M. Einav, F. Erdel, I. Shirat, B. Akabayov

This study identifies SIRT6 as a DNA double-strand break sensor that activates downstream repair pathways and prevents genomic instability.

bioRxiv · Sep 11, 2019Biochemistry

DNA sequence context controls the binding and processivity of T7 DNA primase

A. Afek, S. Ilic, J. Horton, D. Lukatsky, R. Gordan, B. Akabayov

This study uses HTPP to show that DNA sequence context affects T7 primase binding and primer length.

bioRxiv · Feb 17, 2018Biophysics