Author

S. R. Choudhury

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Cancer Biology· 2 Cell Biology· 1 Pharmacology & Toxicology· 1

Signature Assays, Organisms & Methods

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Approach:experimental assay· 4 Research Focus:cell type annotation· 3 Research Focus:differential expression· 2 Research Focus:gene regulatory network inference· 2 Organism:human· 2 Assay:bulk RNA-seq· 1 Assay:ChIP-seq· 1 Research Focus:chromatin & epigenetic regulation· 1

Frequent Co-Authors

S. M. R. Rao· 2 shared U. Bhaduri· 2 shared A. Aburahma· 1 shared A. K. Singh· 1 shared D. Hebenstreit· 1 shared D. T. Rajendran· 1 shared J. E. Sprague· 1 shared J. Zhang· 1 shared

Activity by Year

2018-2021 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 14 mutual co-author links

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2 shared papersCancer Biology

S. M. R. Rao

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4 papers

Recent·Most cited

Pharmacology & ToxicologybioRxivPreprintJan 11, 2021

Fecal microbial transplant abates tolerance to methylone-induced hyperthermia

R. Goldsmith, A. Aburahma, S. Pachhain…·J. E. Sprague

This study shows that fecal microbial transplants can reverse drug-induced hyperthermia tolerance in rats and induce tolerance in naive rats.

DOI 10.1101/2021.01.11.426194

ratmetagenomics

𝕏 PostBluesky

Cancer BiologybioRxivSep 17, 2020

LncRNA Hmrhl regulates expression of cancer related genes in Chronic Myelogenous Leukemia through chromatin association

S. R. Choudhury, S. Dutta, U. Bhaduri, S. M. R. Rao

This study identifies Hmrhl as a regulator of cancer-related genes in CML through chromatin association and functional experiments.

DOI 10.1093/narcan/zcab042

humanbulk RNA-seq

𝕏 PostBluesky

Cell BiologybioRxivAug 26, 2018

The RNA helicase UPF1 associates with mRNAs co-transcriptionally and is required for the release of mRNAs from transcription sites

A. K. Singh, S. R. Choudhury, S. De…·S. Brogna

This study shows UPF1 associates with nascent RNAs in the nucleus and is required for mRNA release from transcription sites in Drosophila.

DOI 10.7554/elife.41444

DrosophilaChIP-seq

𝕏 PostBluesky

Cancer BiologybioRxivAug 16, 2018

A novel enhancer RNA, Hmrhl, positively regulates its host gene, phkb, in Chronic Myelogenous Leukemia

R. Fatima, S. R. Choudhury, D. T. Rajendran…·S. M. R. Rao

This study identifies Hmrhl, a long noncoding RNA that enhances its host gene phkb in chronic myelogenous leukemia.

DOI 10.1016/j.ncrna.2019.08.001

humanlong-read sequencing

𝕏 PostBluesky