Author

S. Shimamura

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Evolutionary Biology· 2 Microbiology· 1

Signature Assays, Organisms & Methods

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Research Focus:cell type annotation· 2 Approach:experimental assay· 2 Research Focus:chromatin & epigenetic regulation· 1 Research Focus:gene regulatory network inference· 1 Organism:human· 1 Research Focus:metabolism & bioenergetics· 1 Assay:metabolomics· 1 Organism:mouse· 1

Frequent Co-Authors

A. Arimoto· 1 shared A. Toyoda· 1 shared H. Atomi· 1 shared H. Ishida· 1 shared H. Ishii· 1 shared H. Matsumura· 1 shared J. Minagawa· 1 shared J. Obokata· 1 shared

Activity by Year

2020-2023 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 18 mutual co-author links

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1 shared paperEvolutionary Biology

A. Arimoto

Mutual co-authors in cluster

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3 papers

Recent·Most cited

Development of a rapid and highly accurate method for 13C tracer-based metabolomics and its application on a hydrogenotrophic methanogen

Y. Fukuyama, S. Shimamura, S. Sakai, Y. Michimori, T. Sumida, Y. Chikaraishi, H. Atomi, T. Nunoura

The paper develops a CE-MS method for 13C tracer-based metabolomics and applies it to identify central carbon metabolism and amino acid biosynthesis in a methanogen.

bioRxiv · Aug 31, 2023 · PreprintMicrobiology

Palaeoproteomic investigation of an ancient human skeleton with abnormal deposition of dental calculus

Y. Uchida-Fukuhara, S. Shimamura, R. Sawafuji, T. Nishiuchi, M. Yoneda, H. Ishida, H. Matsumura, T. Tsutaya

The paper uses palaeoproteomics to analyze dental calculus from an ancient human skeleton, identifying bacterial and host proteins related to periodontal disease and defense responses.

bioRxiv · Aug 15, 2023 · PreprintEvolutionary Biology

Chloroplast acquisition without the gene transfer in kleptoplastic sea slugs, Plakobranchus ocellatus

T. Maeda, S. Takahashi, T. Yoshida, S. Shimamura, Y. Takaki, Y. Nagai, A. Toyoda, Y. Suzuki, A. Arimoto, H. Ishii, N. Satoh, T. Nishiyama, M. Hasebe, T. Maruyama, J. Minagawa, , S. Shigenobu

This study sequenced the genome of a kleptoplastic sea slug and found no evidence of algal gene transfer to the nucleus, showing photosynthesis can occur without nuclear gene transfer.

bioRxiv · Jun 16, 2020 · PreprintEvolutionary Biology