T. K. Phung

This paper introduces Golgi-IP, a method to isolate and analyze the human Golgi's proteome, metabolome, and lipidome, revealing novel components and metabolic features.

This study identifies that PKC isoforms activate LRRK1 by phosphorylating specific residues in the CORB GTPase domain, enhancing kinase activity.

This study uses molecular dynamics simulations to show how specific glycosylation sites on SARS-CoV-2 spike protein affect RBD stability and infectivity.

This study evaluates glycoproteomics software performance using human serum datasets, identifies high-performance strategies, and provides recommendations for improved analysis.

This study shows that N-glycosylation on OsRGLP1 is conserved but not required for stability or activity, and describes a method for its efficient production in E. coli.

This study analyzes the post-translational modification landscape of 23 commercial Australian beers using DIA/SWATH-MS, revealing high diversity in PTMs and brewery-specific glyco/proteome profiles.

This study quantitatively analyzes glycoproteomics in sparkling wines to assess aging and yeast strain effects on glycosylation profiles.

The paper uses DIA-MS proteomics to predict rFIX yield and quality by analyzing bioreactor supernatant, identifying PTMs and their impact on purification and function.

This study uses proteomics to show that barley seed germination involves loss of stress proteins and mobilization of nutrient stores, with differences in dormant seeds.

This paper develops a high-throughput glycoproteomics method to measure site-specific polysialylation using LC-ESI-MS/MS after mild acid hydrolysis and desialylation.

This study quantifies changes in barley seed proteomes under fungal infection using SWATH-MS, finding minimal and variable effects on seed proteins.

This study uses mass spectrometry proteomics to analyze the dynamic proteome of beer production, identifying significant changes in protein abundance and modifications across process steps.