Author

Y. Sudo

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Biochemistry· 2 Microbiology· 1 Physiology· 1

Signature Assays, Organisms & Methods

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Approach:experimental assay· 3 Research Focus:cell type annotation· 2 Assay:proteomics· 2 Organism:bacteria (other)· 1 Organism:mouse· 1 Organism:multiple species· 1 Research Focus:protein structure prediction· 1 Approach:statistical model· 1

Frequent Co-Authors

K. Kojima· 3 shared A. Marchetti· 1 shared A. Yamashita· 1 shared G. Armin· 1 shared H. Fukuzawa· 1 shared H. Ishikita· 1 shared H. Iwanari· 1 shared H. Miyashita· 1 shared

Activity by Year

2021-2022 · peak 3/yr

Co-Author Collaboration Network

10 top collaborators · 17 mutual co-author links

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3 shared papersBiochemistry

K. Kojima

Mutual co-authors in cluster

Author profile →

4 papers

Recent·Most cited

Proton-pumping rhodopsins in marine diatoms

S. Yoshizawa, T. Azuma, K. Kojima, K. Inomura, M. Hasegawa, Y. Nishimura, M. Kikuchi, G. Armin, H. Miyashita, K. Ifuku, T. Yamano, A. Marchetti, H. Fukuzawa, Y. Sudo, R. Kamikawa

This study identifies diatom rhodopsin as a light-driven proton pump localized to plastid membranes and suggests it contributes to a CO2-concentrating mechanism in diatoms.

bioRxiv · Jan 18, 2022 · PreprintMicrobiology

Skeletal muscle releases extracellular vesicles with distinct protein and miRNA signatures that accumulate and function within the muscle microenvironment

S. Watanabe, Y. Sudo, S. Kimura, K. Tomita, M. Noguchi, H. Sakurai, M. Shimizu, Y. Takahashi, R. Sato, Y. Yamauchi

This study identifies markers for skeletal muscle-derived extracellular vesicles (SkM-EVs) and shows they mainly function within the muscle microenvironment rather than contributing significantly to plasma EVs.

bioRxiv · Nov 30, 2021Physiology

Structure and mechanism of oxalate transporter OxlT in an oxalate-degrading bacterium in the gut microbiota

T. Jaunet-Lahary, T. Shimamura, M. Hayashi, N. Nomura, K. Hirasawa, T. Shimizu, M. Yamashita, K. Kojima, Y. Sudo, T. Tamura, H. Iwanari, T. Hamakubo, S. Iwata, K.-i. Okazaki, T. Hirai, A. Yamashita

This study determines the crystal structures of OxlT, an oxalate transporter, and reveals its mechanism for selective oxalate uptake and exclusion of other carboxylates.

bioRxiv · Nov 15, 2021Biochemistry

Proton-mediated gating mechanism of anion channelrhodopsin-1

M. Tsujimura, K. Kojima, S. Kawanishi, Y. Sudo, H. Ishikita

The paper investigates the proton-mediated gating mechanism of GtACR1 by analyzing mutants and using computational methods to determine the protonation states and their effects on absorption wavelengths.

bioRxiv · Jul 22, 2021Biochemistry