Author
Lukasz J. Bugaj
Abramson Cancer CenterORCID 0000-0002-0749-2912Unclaimed ORCID profile · follow to get notified of new preprints
Biology Disciplines
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2020-2026 · peak 6/yrCo-Author Collaboration Network
10 top collaborators · 24 mutual co-author links11 papers
Recent·Most cited
- BioengineeringACS Synthetic BiologyPeer-reviewed
Optogenetic translocation to subcellular compartments through regulation of protein avidity
Zikang Dennis Huang, Yueying Gu, Yuzhi Carol Gao…·Lukasz J. Bugaj
This paper introduces Aviatar, a single-component optogenetic system for inducible protein translocation to various subcellular compartments, demonstrating its utility in regulating actin polymerization and cancer-related signaling.
1 citation - Cancer BiologybioRxivPreprint
Low-order assemblies drive oncogenic RTK fusion signaling without condensation
David Gonzalez-Martinez, Thomas R. Mumford, Delaney Wilde…·Lukasz J. Bugaj
This study shows that low-order RTK fusions can drive oncogenic signaling without forming condensates, challenging the role of condensation in signal transmission.
1 citation - Cancer BiologybioRxivPreprint
EGFR suppression and drug-induced potentiation are widespread features of oncogenic RTK fusions
Yuzhi Gao, David Gonzalez-Martinez, Sofia Wissert…·Lukasz J. Bugaj
The paper shows that RTK fusions suppress EGFR and sequester Grb2, and targeted therapies reverse this suppression, enhancing EGFR signaling and drug response.
3 citations - BiochemistrybioRxivPreprint
Nuclear-import receptors remodel the dilute phase to suppress phase transitions of RNA-binding proteins with prion-like domains.
Miriam Linsenmeier, Min Kyung Shinn, Thomas R. Mumford…·James Shorter
This study shows nuclear-import receptors suppress RNA-binding protein phase transitions by remodeling the dilute phase, preventing disease-linked aggregation.
DOI 10.1101/2025.11.14.688546 - Systems BiologyScientific ReportsPeer-reviewed
Quantifying cancer- and drug-induced changes in Shannon information capacity of RTK signaling
Paweł Nałęcz‐Jawecki, Lee Roth, Frederic Grabowski…·Tomasz Lipniacki
The paper quantifies how cancer and drug treatments affect the information capacity of RTK signaling pathways using optogenetic stimulation and information theory.
- Systems BiologybioRxivPreprint
Intramolecular competition generates pulsatory protein activity shaped by light, temperature, and evolution
Zikang Dennis Huang, Malvin Forson, William K. J. Benman…·Lukasz J. Bugaj
The paper shows that proteins can dynamically encode environmental information through domain interactions, with pulsatory responses shaped by light, temperature, and evolution.
2 citations - Synthetic BiologyNature MethodsPeer-reviewed
A temperature-inducible protein module for control of mammalian cell fate
William K. J. Benman, Zikang Dennis Huang, Pavan Iyengar…·Lukasz J. Bugaj
This paper introduces a temperature-inducible protein module called Melt that allows reversible control of mammalian cell processes through temperature changes, demonstrating its utility in cell death control in a mouse cancer model.
23 citationstop 2% - BioengineeringCell SystemsPeer-reviewed
Multiplexed dynamic control of temperature to probe and observe mammalian cells.
William K. J. Benman, Pavan Iyengar, Thomas R. Mumford…·Lukasz J. Bugaj
The paper introduces thermoPlate, a device for dynamic temperature control in cell culture, and uses it to study temperature-dependent cellular responses like phase separation and stress granule dynamics.
- Synthetic BiologyCommunications BiologyPeer-reviewed
High-throughput feedback-enabled optogenetic stimulation and spectroscopy in microwell plates
William K. J. Benman, Saachi Datta, David Gonzalez-Martinez…·Lukasz J. Bugaj
The paper introduces an open-source device for high-throughput optogenetic experiments in microwell plates, enabling automated stimulation, spectroscopy, and feedback control in E. coli.
- Systems BiologyCell SystemsPeer-reviewed
Optogenetic control reveals differential promoter interpretation of transcription factor nuclear translocation dynamics
Susan Y. Chen, Lindsey C. Osimiri, Michael W. Chevalier…·Hana El‐Samad
The paper introduces CLASP, an optogenetic tool to control TF localization, and shows differential promoter responses to pulsatile vs. continuous TF inputs.
64 citations