Ádám Fülöp

LoRTIA Plus improves transcriptome annotation from long-read RNA-seq data by achieving high F1 scores for TSSs, TESs, and transcripts across multiple chemistries and organisms.

This paper uses long-read RNA sequencing to create a comprehensive transcriptomic atlas of Caviid Gammaherpesvirus 1, revealing its transcriptome and regulatory mechanisms.

This study enhances the annotation of the KSHV transcriptome using long-read and short-read sequencing, identifying novel transcripts and improving existing annotations.

The paper uses long-read sequencing to identify novel Ori-proximal transcripts in herpesviruses, revealing regulatory complexity in DNA replication and transcription.