Author

Nicky O’Boyle

National University of IrelandORCID 0000-0002-8669-7237Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Microbiology· 2 Molecular Biology· 1

Signature Assays, Organisms & Methods

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Assay:bulk RNA-seq· 3 Research Focus:differential expression· 3 Organism:E. coli· 3 Approach:statistical model· 3 Research Focus:gene regulatory network inference· 1 Organism:human· 1 Organism:mouse· 1

Frequent Co-Authors

Andrew J. RoeiD· 3 shared Patricia T. RimbiiD· 2 shared David R. MarkiD· 1 shared Gillian R. DouceiD· 1 shared James P. R. ConnollyiD· 1 shared Jennifer C. HallamiD· 1 shared Kabo R. WaleiD· 1 shared Mariagrazia PizzaiD· 1 shared

Activity by Year

2021-2024 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 23 mutual co-author links

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3 shared papersMicrobiology

Andrew J. RoeORCID

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3 papers

Recent·Most cited

MicrobiologyOpen BiologyPeer-reviewedNov 1, 2024

Aurodox, a polyketide from Streptomyces goldiniensis, inhibits transcription of the type III secretion system of multiple Gram-negative pathogens

David R. Mark, Nicky O’Boyle, Kabo R. Wale…·Andrew J. Roe

This study investigates aurodox's effect on T3SS in multiple Gram-negative pathogens, showing it inhibits some but not all T3SS systems, with selectivity observed across different strains.

3 citations

E. colimouse

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MicrobiologyJournal of Applied MicrobiologyPeer-reviewedMar 14, 2024

Enhancing a multipurpose artificial urine for culture and gene expression studies of uropathogenic Escherichia coli strains

Patricia T. Rimbi, Nicky O’Boyle, Gillian R. Douce…·Andrew J. Roe

This study enhances an artificial urine medium to support growth of UPEC strains and shows similar gene expression profiles compared to pooled human urine.

7 citations

E. colibulk RNA-seq

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Molecular BiologyMicrobiologyPeer-reviewedOct 8, 2021

D-serine induces distinct transcriptomes in diverse Escherichia coli pathotypes

James P. R. Connolly, Natasha C. A. Turner, Jennifer C. Hallam…·Nicky O’Boyle

This study shows that D-serine induces distinct transcriptional responses in three Escherichia coli pathotypes, with no common differentially expressed genes across all strains.

10 citations

E. colibulk RNA-seq

𝕏 PostBluesky