Author

Ronen Levy

Weizmann Institute of ScienceORCID 0000-0002-9574-2132Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Signature Assays, Organisms & Methods

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Assay:bulk RNA-seq· 1 Research Focus:cell type annotation· 1 Approach:deep learning· 1 Research Focus:differential expression· 1 Research Focus:gene regulatory network inference· 1 Organism:mouse· 1 Approach:optimal transport· 1 Research Focus:phylogenetics / evolution· 1

Frequent Co-Authors

Alejandro A. SchäfferiD· 2 shared Osnat BartokiD· 2 shared Yardena SamuelsiD· 2 shared Ansuman T. SatpathyiD· 1 shared Chen WelleriD· 1 shared Chi‐Ping DayiD· 1 shared Colin J. RaposoiD· 1 shared Dean RanmariD· 1 shared

Activity by Year

2020-2024 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 35 mutual co-author links

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2 shared papersCancer Biology

Alejandro A. SchäfferORCID

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2 papers

Recent·Most cited

Cancer BiologyCancer DiscoveryPeer-reviewedNov 20, 2024

Temporal genomic analysis of melanoma rejection identifies regulators of tumor immune evasion

Sapir Cohen Shvefel, Joy A. Pai, Yingying Cao…·Yardena Samuels

The paper identifies Mif as a regulator of tumor immune evasion in low intra-tumor heterogeneity melanoma by analyzing single-cell RNA sequencing data and validating in patient data.

21 citations

mousescRNA-seq

𝕏 PostBluesky

BioinformaticsBioinformaticsPeer-reviewedJul 1, 2020

PhISCS-BnB: A Fast Branch and Bound Algorithm for the Perfect Tumor Phylogeny Reconstruction Problem

Erfan Sadeqi Azer, Farid Rashidi Mehrabadi, Salem Malikić…·S. Cenk Şahinalp

PhISCS-BnB computes the most likely perfect tumor phylogeny from single-cell sequencing data, offering optimality guarantees and significant speed improvements over existing methods.

21 citations

bulk RNA-seqoptimal transport

𝕏 PostBluesky