Topic · Molecular Biology · Biochemistry, Genetics and Molecular Biology
Pluripotent Stem Cells Research
OpenAlex topic; a paper is listed when OpenAlex scores it at least 0.5 for this topic.
1,000+ papers
- Molecular BiologybioRxivPreprint
DOT1L induces RNAPII accumulation independent of its catalytic activity in pluripotent stem cells
The paper shows that inducing DOT1L in serum/LIF ESCs increases RNAPII accumulation at transcription start sites, mimicking 2i/LIF conditions, but without altering steady-state RNA expression.
DOI 10.1101/2025.08.08.668971 - Developmental BiologybioRxivPreprint
Perturb-seq reveals distinct responses to pluripotency regulator dosages underlying the control of self-renewal and differentiation
Jielin Yan, Hyunwoo Cho, Renhe Luo…·Danwei Huangfu
This study uses Perturb-seq to analyze how varying levels of pluripotency regulators affect hESC self-renewal and differentiation through single-cell RNA-seq.
- Developmental BiologybioRxivPreprint
A blastocyst-derived in vitro model of the human chorion
Luca C. Schwarz, Matthew James Shannon, Gina L. McNeill…·Marta N. Shahbazi
This paper develops an in vitro model of the human chorion using blastocysts to generate trophoblast organoids and extraembryonic mesoderm cells, enabling study of placental development and pathophysiology.
3 citations - Cell BiologybioRxivPreprint
A new NHGRI Sample Repository for Human Genetic Research collection of induced pluripotent stem cell lines.
Tatyana Pozner, Christine Grandizio, Matthew W. Mitchell…·Laura Scheinfeldt
The paper describes a new NHGRI Sample Repository containing seven iPSC lines generated from PBMCs, with genomic data for studying genetic variation and its functional implications.
2 citations - Developmental BiologybioRxivPreprint
Chromatin priming by transcription factor ELF3 confers transcriptional competence for amniotic differentiation on primed human embryonic stem cells
Masatoshi Ohgushi, Kaori Honda, Hitoshi Niwa, Mototsugu Eiraku
1 citation - Developmental BiologybioRxivPreprint
STAT3 regulates basal cell identity and morphogenesis during early esophageal development
Secunda W. Kariuki, Yosuke Mitani, Dominique D. Bailey…·Ricardo Cruz‐Acuña
This study shows STAT3 is essential for esophageal progenitor cell development and epithelial morphogenesis in humans, but not in mice.
- Developmental BiologyNature CommunicationsPeer-reviewed
Suppression of ERK signalling promotes pluripotent epiblast in the human blastocyst
Claire S. Simon, Afshan McCarthy, Laura M. Woods…·Kathy K. Niakan
The paper shows that inhibiting ERK signaling expands epiblast cells capable of becoming naive pluripotent stem cells in humans, while FGF stimulation expands hypoblast markers.
18 citationstop 4% - Systems BiologybioRxivPreprint
Signatures of digital Polycomb regulation in functional iPSC heterogeneity between individuals
Ander Movilla Miangolarra, Julia Kurlovich, Fereshteh Torabi…·Martin Howard
The paper identifies Polycomb-regulated gene expression and chromatin state differences in iPSCs that correlate with differentiation efficiency.
DOI 10.1101/2025.07.25.666753 - Developmental BiologyBiology of ReproductionPeer-reviewed
Stage-sensitive potential of isolated rabbit ICM to differentiate into extraembryonic lineages
Katarzyna Filimonow, Anna Chołoniewska, Jan Chołoniewski…·Anna Piliszek
This study investigates the developmental potential of rabbit ICMs to differentiate into extraembryonic lineages, finding that early-stage ICMs can form a blastocyst-like structure with TE and primitive endoderm, while later-stage ICMs lose TE specification ability.
- Cell BiologybioRxivPreprint
Generation of Neural Stem/Progenitor-like Cells from Cultured Human Peripheral Blood Mononuclear Cells combined with Cannabidiol
Saw Kalayar Aye, Sineenat Sripattanakul, Krai Daowtak, Chalermchai Pilapong
This study shows that cannabidiol can reprogram peripheral blood mononuclear cells into neural stem/progenitor-like cells through direct reprogramming.
DOI 10.1101/2025.07.18.665629 - Synthetic BiologybioRxivPreprint
Harnessing Dynamic Cell Responses to Optimise Pluripotency Protocols
Antonella La Regina, Elisa Pedone, Lucia Marucci
This study designs new pluripotency maintenance protocols by leveraging cellular response dynamics to reduce drug exposure while maintaining pluripotency in mouse embryonic stem cells.
DOI 10.1101/2025.07.17.665308 - Developmental BiologybioRxivPreprint
Juxtaposition of human pluripotent stem cells with amnion-like cells is sufficient to trigger primitive streak formation
Xiangyu Kong, Anastasiia Nemashkalo, M. Cecilia Guerra…·Aryeh Warmflash
This study shows that juxtaposing amnion-like cells with human pluripotent stem cells initiates gastrulation behaviors, including primitive streak formation and mesendodermal differentiation.
2 citations - BioengineeringSciencePeer-reviewed
Human neuron subtype programming through combinatorial patterning with scRNA-seq readouts
Hsiu‐Chuan Lin, Jasper Janssens, Benedikt Eisinger…·Barbara Treutlein
The paper programs human neuron subtypes using combinatorial patterning and scRNA-seq to identify diverse neuron types and their developmental signaling networks.
- Synthetic BiologybioRxivPreprint
Derivation of cardiomyocyte-propelled motile aggregates from stem cells
Christine Ho, Fokion Glykofrydis, Gaveen Godage…·Leonardo Morsut
The paper demonstrates a novel protocol to generate motile cardiomyocyte aggregates from mouse embryonic stem cells, enhancing their contractility and motility for biobot development.
1 citation - NeurosciencebioRxivPreprint
One-step induction of human GABAergic neurons promotes presynaptic development & synapse maturation
Torben W. van Voorst, Maaike A. van Boven, Kevin I. Marinus…·Lennart Niels Cornelisse
This study develops a single-step transposon-based method to generate pure GABAergic neurons from iPSCs, showing they mature synaptically and form functional networks.
3 citations - Cell BiologyBiologyPeer-reviewed
Macrophage Migration Inhibitory Factor Suppresses Natural Killer Cell Response and Promotes Hypoimmunogenic Stem Cell Engraftment Following Spinal Cord Injury
Shenglan Li, Yiyan Zheng, Haipeng Xue…·Ying Liu
This study shows that overexpressing MIF in hypoimmunogenic iPSC-derived NPCs reduces NK cell attack and improves engraftment in SCI models.
2 citations - Cell BiologyTherapeuticsPeer-reviewed
Novel 2D/3D Hybrid Organoid System for High-Throughput Drug Screening in iPSC Cardiomyocytes
Jordann Lewis, Basil Yaseen, Haodi Wu, Anita P. Saraf
The paper develops a 2D/3D hybrid organoid system for high-throughput drug screening in iPSC cardiomyocytes, validated using doxorubicin to assess cardiotoxicity and electrophysiological effects.
7 citations - Developmental BiologyBiochemistry and Biophysics ReportsPeer-reviewed
Mesendodermal cells fail to contribute to heart formation following blastocyst injection
The paper shows that mesendodermal cells induced from mouse embryonic stem cells fail to contribute to heart formation when injected into blastocysts.
DOI 10.1016/j.bbrep.2025.102120 - NeurosciencebioRxivPreprint
Analysis of astrocyte progenitors derived from human induced pluripotent stem cells in vitro and following transplantation into the intact spinal cord.
Alessia Niceforo, Ying Jin, Skandha Ramakrishnan…·Itzhak Fischer
This study generates and tests astrocyte progenitor cells from hiPSCs, showing their safe survival and integration in spinal cord transplants without adverse effects.
DOI 10.1101/2025.06.27.661961 - Developmental BiologybioRxivPreprint
TFAP2A+ embryonic progenitor cells undergo fate diversification to give rise to human amnion, germline, and mesoderm
Auriana Arabpour, Jonathan DiRusso, Qiu Ya Wu…·Amander T. Clark
The paper shows that TFAP2A+ progenitor cells generate amnion, germline, and mesoderm through BMP signaling and basement membrane cues in vitro.
2 citations - BioengineeringNature Cardiovascular ResearchPeer-reviewed
Maturation of human cardiac organoids are required for disease modelling and drug discovery
Mark W. Pocock, Janice D. Reid, Harley R. Robinson…·James E. Hudson
This study shows that maturing human cardiac organoids enhances disease modeling and drug discovery by mimicking in vivo development and enabling therapeutic testing for DSP cardiomyopathy.
39 citationstop 1% - Developmental BiologyNature Biomedical EngineeringPeer-reviewed
Self-Organization of Sinusoidal Vessels in Pluripotent Stem Cell-derived Human Liver Bud Organoids
Norikazu Saiki, Yasunori Nio, Yosuke Yoneyama…·Takanori Takebe
This study develops a method to generate human liver bud organoids with functional sinusoidal vessels, demonstrating their potential for coagulation disorder therapies.
41 citationstop 1% - Developmental BiologybioRxivPreprint
The generation of viable, structurally integrated human-mouse chimaeras through enhanced hPSCs proliferation
Hideyuki Sato, Ayaka Yanagida, Mariko Kasai…·Hiromitsu Nakauchi
This paper enhances human pluripotent stem cell (hPSC) proliferation to improve chimaerism in human-mouse chimaeras, resulting in viable pups with integrated hPSC-derived tissues.
- BioengineeringbioRxivPreprint
Donor Age Impairs Vasculogenic Potential of hiPSC-Derived Endothelial Progenitors
Bryce Larsen, Cody J. Callahan, Arshitha Rayanki…·Janet Zoldan
This study shows that donor age impairs the vasculogenic potential of hiPSC-derived endothelial progenitors, with older donor cells forming less functional vascular structures and showing epigenetic and transcriptomic differences.
1 citation - BiochemistrybioRxivPreprint
Extended NGN2 Expression in iPSCs Dramatically Enhances Purity of Neuronal Cultures
Jesús Muñoz‐Estrada, Andrew Mostafania, Lahiruni M. Halwatura…·Jesse G. Meyer
The paper shows that extended NGN2 expression in iPSCs improves neuronal culture purity by reducing heterogeneity caused by suboptimal differentiation.
1 citation - Cell BiologyStem CellsPeer-reviewed
Healthy human induced pluripotent stem cell-derived cardiomyocytes exhibit sex dimorphism even without the addition of hormones
Sophie E. Givens, Abygail A Andebrhan, Eric G. Schmuck…·Brenda M. Ogle
The paper generates hiPSC-CM from male and female donors and finds sex dimorphism in calcium handling and gene expression without hormone exposure.
4 citations - Cell BiologybioRxivPreprint
Multi-omics reveal critical differentiation target for Parkinsons' Disease-vulnerable midbrain dopaminergic neurons
Roberto García‐Swinburn, Guochang Lyu, Judith C. Kreutzmann…·Ernest Arenas
The paper develops a multi-omics guided differentiation protocol to generate PD-vulnerable midbrain dopaminergic neurons, showing improved yield and functional recovery in mice.
- Cell BiologyPLoS ONEPeer-reviewed
Non-viral derivation of induced pluripotent stem cells from the canine umbilical cord
Atsushi Yamazaki, Seiji Shiozawa, Yuko Koushige…·Kazuya EDAMURA
This study generates non-viral canine induced pluripotent stem cells (iPSCs) from umbilical cord fibroblasts, confirming their pluripotency and differentiation potential.
- Cell BiologybioRxivPreprint
FOXM1 Inhibition Promotes Polyploidization and Metabolic Maturation in Human iPSC-Derived Hepatocytes by Modulating the Wnt/β-Catenin Pathway
Kayque Alves Telles-Silva, Lara Varela Bastos Pacheco, Sabrina Komatsu…·Mayana Zatz
This study shows that FOXM1 inhibition promotes terminal differentiation of human iPSC-derived hepatocytes by enhancing polyploidization and metabolic maturation through the Wnt/β-catenin pathway.
DOI 10.1101/2025.06.17.660221