Author

B. Kaczkowski

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Bioengineering· 2 Physiology· 1

Signature Assays, Organisms & Methods

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Research Focus:cell type annotation· 3 Organism:human· 3 Assay:bulk RNA-seq· 2 Research Focus:clustering· 1 Research Focus:differential expression· 1 Research Focus:drug response / drug discovery· 1 Approach:experimental assay· 1 Approach:genetic perturbation / CRISPR· 1

Frequent Co-Authors

E. Arner· 3 shared A. T.-J. Kwon· 2 shared M. Takahashi· 2 shared A. Hasegawa· 1 shared A. Maeda· 1 shared A. Mardinoglu· 1 shared A. Tachibana· 1 shared C. J. Sundberg· 1 shared

Activity by Year

2020-2023 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 28 mutual co-author links

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3 shared papersBioengineering

E. Arner

Mutual co-authors in cluster

Author profile →

3 papers

Recent·Most cited

Molecular profiling of high-level athlete skeletal muscle after acute exercise - a systems biology approach

S. M. Reitzner, E. B. Emanuelsson, M. Arif, B. Kaczkowski, A. T.-J. Kwon, A. Mardinoglu, E. Arner, M. A. Chapman, C. J. Sundberg

This study examines how acute exercise affects multi-omics profiles in skeletal muscle of trained and untrained individuals, revealing distinct metabolic and transcriptional responses based on training history and exercise type.

bioRxiv · Apr 11, 2023Physiology

Efficient Development of Platform Cell Lines Using CRISPR-Cas9 and Transcriptomics Analysis

A. T.-J. Kwon, K. Mohri, S. Takizawa, T. Arakawa, M. Takahashi, B. Kaczkowski, M. Furuno, H. Suzuki, S. Tagami, H. Mukai, E. Arner

The paper develops CRISPR-Cas9 mutants of U87MG cells to create platform cell lines for drug testing, finding that transcriptomic analysis helps identify clones with minimal phenotypic divergence from wild type.

bioRxiv · Sep 16, 2020 · PreprintBioengineering

Inducing Human Retinal Pigment Epithelium-like Cells from Somatic Tissue

I. N. Woogeng, I. Abugessaisa, A. Tachibana, Y. Sahara, C.-C. Hon, A. Hasegawa, B. Kaczkowski, N. Sakai, M. Nishida, H. Hu, H. Sanyal, J. Sho, T. Kasukawa, M. Takasato, P. Carninci, , C. Kime

This study develops a simplified method to induce RPE-like cells from human fibroblasts and validates their properties using single-cell RNA sequencing.

bioRxiv · Jul 27, 2020Bioengineering