Author

B. Allen

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Ecology· 2 Biophysics· 1 Immunology· 1 Microbiology· 1

Signature Assays, Organisms & Methods

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Approach:experimental assay· 4 Organism:mouse· 4 Assay:metagenomics· 3 Research Focus:cell type annotation· 2 Research Focus:differential expression· 2 Research Focus:host-pathogen & immune response· 2 Assay:proteomics· 2 Approach:statistical model· 2

Frequent Co-Authors

T. Troitsky· 2 shared A. Berlinberg· 1 shared A. Dowdell· 1 shared A. Husby· 1 shared A. M. Raulo· 1 shared A. Ornelas Sanchez· 1 shared A. Pena-Francesch· 1 shared A. Raulo· 1 shared

Activity by Year

2016-2023 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 14 mutual co-author links

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Curved chords = mutual co-authorship

2 shared papersEcology

T. Troitsky

Mutual co-authors in cluster

Author profile →

5 papers

Recent·Most cited

Microbiota-dependent indole production is required for the development of collagen-induced arthritis

B. Seymour, B. Trent, B. Allen, A. Berlinberg, J. Tangchittsumran, W. Jubair, M. Chriswell, S. Liu, A. Ornelas Sanchez, A. Stahly, E. Alexeev, A. Dowdell, S. Sneed, S. Fechtner, J. Kofonow, , K. A. Kuhn

This study shows that microbiota-dependent indole production is essential for collagen-induced arthritis development and identifies potential therapeutic targets.

bioRxiv · Oct 13, 2023 · PreprintImmunology

Synchronous seasonality in the gut microbiota of wild wood mouse populations

K. J. Marsh, A. M. Raulo, M. Brouard, T. Troitsky, H. M. English, B. Allen, R. Raval, J. P. Webster, S. C. L. Knowles

The paper examines gut microbiota seasonality in wild wood mice, finding consistent seasonal restructuring despite taxonomic divergence between populations.

bioRxiv · Oct 15, 2021 · PreprintEcology

Social networks strongly predict the gut microbiota of wild mice

A. Raulo, B. Allen, T. Troitsky, A. Husby, J. Firth, T. Coulson, S. Knowles

This study shows social network structure predicts gut microbiota similarity in wild mice, with male interactions driving microbial transmission and hub individuals having more diverse microbiotas.

bioRxiv · Sep 24, 2020Ecology

Depletion of microbiome-derived molecules in the host using Clostridium genetics

C.-J. Guo, B. Allen, K. Hiam, D. Dodd, W. van Treuren, S. Higginbottom, C. Fischer, J. Sonnenburg, M. Spitzer, M. Fischbach

This study develops a genetic method to disable Clostridium species and investigates the impact of microbiome-derived molecules on host IgA modulation.

bioRxiv · Aug 27, 2018Microbiology

ULTRAFAST LASER-PROBING SPECTROCOPY FOR STUDYING MOLECULAR STRUCTURE OF POLYMERIC PROTEINS

H. Jung, C. Szwejkowski, A. Pena-Francesch, B. Allen, S. Ozdemir, P. Hopkins, M. Demirel

This paper develops a laser-probing spectroscopy technique to quantify polymeric protein crystallinity in real time.

bioRxiv · Oct 19, 2016Biophysics