Author

I. Braasch

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Evolutionary Biology· 6 Immunology· 1

Signature Assays, Organisms & Methods

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Approach:statistical model· 5 Assay:bulk RNA-seq· 3 Research Focus:development & morphogenesis· 3 Research Focus:gene regulatory network inference· 3 Organism:multiple species· 3 Research Focus:cell type annotation· 2 Approach:comparative / phylogenetic analysis· 2 Approach:experimental assay· 2

Frequent Co-Authors

A. W. Thompson· 4 shared C. Berthelot· 2 shared C. Cabau· 2 shared C. Klopp· 2 shared E. Jouanno· 2 shared J. Bobe· 2 shared J. Montfort· 2 shared J. Postlethwait· 2 shared

Activity by Year

2017-2023 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 35 mutual co-author links

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4 shared papersEvolutionary Biology

A. W. Thompson

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Author profile →

7 papers

Recent·Most cited

Distinct ossification trade-offs illuminate the shoulder girdle reconfiguration at the water-to-land transition.

J. Wei, T. W. P. Wood, K. Flaherty, A. Enny, A. Andrescavage, D. Brazer, D. Navon, T. A. Stewart, H. Cohen, A. Shanabag, S. Kuroda, I. Braasch, T. Nakamura

This study identifies Gli3's role in regulating ossification pathways in zebrafish pectoral girdles, revealing developmental trade-offs that may explain the evolution of tetrapod-like structures.

bioRxiv · Jul 17, 2023Evolutionary Biology

Evolution of the nitric oxide synthase family in vertebrates and novel insights in gill development

G. Annona, I. Sato, J. Pascual-Anaya, I. Braasch, R. Voss, J. Stundl, V. Soukup, S. Kuratani, J. Postlethwait, S. D'Aniello

This study investigates the evolution of nitric oxide synthase (nos) genes across vertebrates, identifying lineage-specific duplications, losses, and expression patterns in gill development.

Proceedings of the Royal Society B: Biological Sciences · Aug 10, 2022Peer-reviewedEvolutionary Biology

Genome structures resolve the early diversification of teleost fishes

E. Parey, A. Louis, J. Montfort, O. Bouchez, C. Roques, C. Iampietro, J. Lluch, A. Castinel, C. Donnadieu, T. Desvignes, C. F. Bucao, E. Jouanno, M. Wen, S. Mejri, R. P. Dirks, , Y. Guiguen

The paper uses genome assemblies to resolve the evolutionary relationships among early diverging teleost lineages, placing Elopomorpha and Osteoglossomorpha as sister groups.

bioRxiv · Apr 7, 2022Evolutionary Biology

Deterministic shifts in molecular evolution correlate with convergence to annualism in killifishes

A. W. Thompson, A. C. Black, Y. Huang, Q. Shi, A. I. Furness, I. Braasch, F. G. Hoffmann, G. Orti

The paper shows that annual life history in killifishes is linked to higher evolutionary rates in genes involved in development and metabolism.

bioRxiv · Aug 9, 2021 · PreprintEvolutionary Biology

Holosteans contextualize the role of the teleost genome duplication in promoting the rise of evolutionary novelties in the ray-finned fish innate immune system

A. Dornburg, D. J. Wcisel, K. Zapfe, E. Ferraro, L. Roupe-Abrams, A. W. Thompson, I. Braasch, T. Ota, J. A. Yoder

This study investigates the innate immune receptor diversity in Holostei, showing that their gene families predate the teleost genome duplication and rival teleost diversity, challenging assumptions about the TGD's role in immune innovation.

bioRxiv · Jun 11, 2021Immunology

Deep evolutionary origin of limb and fin regeneration

S. Darnet, A. Cutrim Dragalzew, D. Baia Amaral, A. W. Thompson, A. N. Cass, J. Lorena, J. F. Sousa, C. M. Costa, M. P. Sousa, N. B. Froebisch, P. N. Schneider, M. C. Davis, I. Braasch, I. Schneider

The paper investigates the evolutionary origin of appendage regeneration in bony vertebrates by analyzing regeneration in multiple fish species and comparing genetic pathways.

bioRxiv · Dec 21, 2018Evolutionary Biology

Evolution of gene expression after whole-genome duplication: new insights from the spotted gar genome

J. Pasquier, I. Braasch, P. Batzel, C. Cabau, J. Montfort, T. Nguyen, E. Jouanno, C. Berthelot, C. Klopp, L. Journot, J. Postlethwait, Y. Guiguen, J. Bobe

The paper analyzes gene expression evolution after whole-genome duplication in teleost fish using the spotted gar genome and PhyloFish data, showing rapid fate determination of duplicates and ongoing functional divergence.

bioRxiv · Jun 19, 2017Evolutionary Biology