Author

J. Batson

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Microbiology· 2 Evolutionary Biology· 1 Physiology· 1

Signature Assays, Organisms & Methods

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Approach:experimental assay· 3 Assay:metagenomics· 3 Research Focus:ecology & biodiversity· 2 Research Focus:host-pathogen & immune response· 2 Assay:bulk RNA-seq· 1 Research Focus:cell type annotation· 1 Approach:deep learning· 1 Assay:DNA methylation· 1

Frequent Co-Authors

G. Dudas· 2 shared A. Bennett· 1 shared A. Kistler· 1 shared A. Kuchta· 1 shared A. Lyden· 1 shared A. McGeever· 1 shared A. P. Lynch· 1 shared A. V. Benest· 1 shared

Activity by Year

2019-2024 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 13 mutual co-author links

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2 shared papersEvolutionary Biology

G. Dudas

Mutual co-authors in cluster

Author profile →

4 papers

Recent·Most cited

The splicing factor kinase SRPK1 is a therapeutic target for Peripheral Vascular Disease

S. R. Bhalla, M. Wahid, J. Amartey, A. Zawia, F. Riu, Y. Gao, J. Agrawal, A. P. Lynch, M. J. Machado, T. Hawtrey, R. Kikuchi, K. R. Green, L. Teboul, C. Allen, Z. Blackley, , D. O. Bates

This paper shows that inhibiting SRPK1 in monocytes promotes angiogenesis by altering VEGF splicing from anti-angiogenic VEGF-A165b to pro-angiogenic VEGF-A165a in both human and mouse models of peripheral arterial disease.

bioRxiv · Apr 17, 2024Physiology

Accumulated metagenomic studies reveal recent migration, whole genome evolution, and undiscovered diversity of orthomyxoviruses

G. Dudas, J. Batson

The paper uses metagenomic data to study the migration, evolution, and diversity of orthomyxoviruses, finding recent global spread and antigenic evolution in W[u]han mosquito virus 6.

bioRxiv · Aug 31, 2022Evolutionary Biology

Single mosquito metatranscriptomics identifies vectors, emerging pathogens and reservoirs in one assay

J. Batson, A. Kistler, G. Dudas, L. Li, K. Ratnasari, E. Haas-Stapleton, P. Logan, H. Retallack

This study uses single mosquito metatranscriptomics to identify vectors, emerging pathogens, and reservoirs in one assay, detecting known and novel viruses and linking pathogens to blood meal sources.

bioRxiv · Feb 10, 2020Microbiology

FLASH: A next-generation CRISPR diagnostic for multiplexed detection of antimicrobial resistance sequences

J. Quan, C. Langelier, A. Kuchta, J. Batson, N. Teyssier, A. Lyden, S. Caldera, A. McGeever, B. Dimitrov, R. King, J. Wilheim, M. Murphy, L. Pesce Ares, K. A. Travisano, R. Sit, , E. D. Crawford

FLASH is a CRISPR-based diagnostic method that enhances detection of low-abundance antimicrobial resistance sequences in metagenomic data.

bioRxiv · May 12, 2019Microbiology