Author
Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.
10 papers
Recent·Most cited
T. Testerman, J. Varga, H. Donohue, C. Vieira Da Silva, J. Graf
The paper describes four novel Pseudomonas species isolated from a rainbow trout farm, identified through genomic, phenotypic, and chemotaxonomic analyses.
bioRxiv · Oct 4, 2022 · PreprintMicrobiology
L. Kunz, A. G. Sotiropoulos, J. Graf, M. Razavi, M. C. Mueller, B. Keller
The paper shows that widespread use of the Pm8 resistance gene in wheat led to hypermutation in the AvrPm8 gene of powdery mildew pathogens, resulting in loss of resistance.
bioRxiv · Aug 24, 2022 · PreprintPlant Biology
T. Testerman, L. Beka, S. R. Reichley, S. King, T. J. Welch, G. D. Wiens, J. Graf
The paper characterizes microbial communities in a freshwater trout aquaculture facility over three years, identifying distinct surface and water communities and the presence of a pathogen linked to disease.
bioRxiv · May 3, 2022Microbiology
M. C. Mueller, L. Kunz, S. Schudel, S. Kammerecker, J. Isaksson, M. Wyler, J. Graf, A. G. Sotiropoulos, C. R. Praz, T. Wicker, S. Bourras, B. Keller
The paper identifies AvrPm17, a fungal avirulence gene that pre-existed in powdery mildew populations and contributed to the rapid breakdown of the introgressed wheat resistance gene Pm17.
bioRxiv · Mar 9, 2021 · PreprintPlant Biology
X. Stachtea, M. B. Loughrey, M. Salvucci, A. Lindner, S. Cho, E. McDonough, A. Sood, J. Graf, A. Santamaria-Pang, A. Corwin, P. Laurent-Puig, S. Dasgupta, S. Van Schaeybroeck, M. Lawler, J. H. M. Prehn, , D. B. Longley
This study uses multiplexed imaging and single-cell analysis to classify immune cells in stage III colorectal cancer patients, finding that multi-marker Treg classification better predicts survival than single markers.
bioRxiv · Feb 24, 2021Cancer Biology
M. E. Stephens, J. Benjamino, J. Graf, D. J. Gage
The paper analyzes the genomes and transcriptomes of Endomicrobium endosymbionts in three protist species of termites, revealing horizontal gene transfer and competence pathways related to carbon metabolism.
bioRxiv · Dec 11, 2020Microbiology
L. Kloub, S. P. Gosselin, M. Fullmer, J. Graf, J. P. Gogarten, M. S. Bansal
This paper introduces HoMer, a computational framework to detect multi-gene horizontal transfers in prokaryotes, revealing insights into gene function, phylogenetic distance, and transfer frequency.
bioRxiv · Aug 27, 2020Evolutionary Biology
S. J. Presley, J. Graf, A. F. Hassan, A. R. Sjodin, M. R. Willig
The paper examines how host species and diet influence oral and rectal microbiome biodiversity in Puerto Rican bats, finding significant effects of host species and diet on rectal microbiome diversity.
bioRxiv · Jan 31, 2020Ecology
E. A. McClure, M. C. Nelson, A. Lin, J. Graf
This study compares the gut microbial communities of two medicinal leech species, showing similar structures and suggesting Macrobdella decora as a viable alternative to Hirudo verbana for research.
bioRxiv · Jun 30, 2019Microbiology
L. T. Rangel, J. Marden, S. Colston, J. C. Setubal, J. Graf, J. P. Gogarten
This study identifies and validates T3SS effector proteins in Aeromonas spp. using a bioinformatics pipeline and experimental validation in yeast, finding 21 effector groups with 15 showing cytotoxicity.
bioRxiv · Mar 7, 2019Microbiology