Author

J. Roach

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Microbiology· 3

Signature Assays, Organisms & Methods

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Approach:experimental assay· 2 Assay:metabolomics· 2 Assay:metagenomics· 2 Research Focus:cell type annotation· 1 Approach:deep learning· 1 Research Focus:host-pathogen & immune response· 1 Organism:human· 1 Research Focus:imputation· 1

Frequent Co-Authors

A. E. Stapleton· 1 shared B. A. Methe· 1 shared B. M. Lin· 1 shared B. W. Goodner· 1 shared C. Pan· 1 shared D. A. Dean· 1 shared D. Bandyopadhyay· 1 shared D. Hiltbrand· 1 shared

Activity by Year

2020-2023 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 12 mutual co-author links

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1 shared paperMicrobiology

A. E. Stapleton

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Author profile →

3 papers

Recent·Most cited

Persistent biofluid small molecule alterations induced by Trypanosoma cruzi infection are not restored by antiparasitic treatment

D. A. Dean, J. Roach, R. Ulrich vonBargen, Y. Xiong, S. S. Kane, L. Klechka, K. Wheeler, M. Jimenez Sandoval, M. Lesani, E. Hossain, M. Katemauswa, M. Schaefer, M. Harris, S. Barron, Z. Liu, , L.-I. McCall

This study identifies persistent urine metabolome alterations in T. cruzi-infected mice that are not reversed by antiparasitic treatment, suggesting urine as a potential diagnostic tool for Chagas Disease.

bioRxiv · Jun 3, 2023Microbiology

Improved Metabolite Prediction Using Microbiome Data-Based Elastic Net Models

J. Xie, H. Cho, B. M. Lin, M. Pillai, L. Heimisdottir, D. Bandyopadhyay, F. Zou, J. Roach, K. Divaris, D. Wu

The paper develops ENVIM, an Elastic Net Model-based method for predicting metabolites from microbiome data, showing improved accuracy over existing methods in oral, gut, and vaginal microbiome datasets.

bioRxiv · Jul 1, 2021Microbiology

Functional gene categories differentiate maize leafdrought-related microbial epiphytic communities

B. A. Methe, D. Hiltbrand, J. Roach, W. Xu, S. G. Gordon, B. W. Goodner, A. E. Stapleton

The paper compares maize leaf microbiomes under drought and well-watered conditions using metagenomic sequencing to identify functional gene category differences.

bioRxiv · Jan 15, 2020Microbiology