Author

L. Sudek

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Immunology· 2 Ecology· 1

Signature Assays, Organisms & Methods

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Assay:bulk RNA-seq· 2 Research Focus:cell signaling & trafficking· 2 Approach:experimental assay· 2 Research Focus:host-pathogen & immune response· 2 Research Focus:cell type annotation· 1 Research Focus:ecology & biodiversity· 1 Research Focus:gene regulatory network inference· 1 Approach:genetic perturbation / CRISPR· 1

Frequent Co-Authors

E. Malekos· 2 shared S. CarpenteriD· 2 shared S. Katzman· 2 shared A. Cabornero· 1 shared A. Coleman· 1 shared A. Mahadevan· 1 shared A. Pascual· 1 shared A. Z. Worden· 1 shared

Activity by Year

2023-2023 · peak 3/yr

Co-Author Collaboration Network

10 top collaborators · 20 mutual co-author links

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2 shared papersImmunology

E. Malekos

Mutual co-authors in cluster

Author profile →

3 papers

Recent·Most cited

CRISPRi screens identify the lncRNA, LOUP, as a multifunctional locus regulating macrophage differentiation epigenetically and inflammatory signaling through a short, encoded peptide

H. Halasz, E. Malekos, S. Covarrubias, S. Yitiz, C. Montano, L. Sudek, S. Katzman, S. J. Liu, M. A. Horlbeck, J. S. Weissman, S. Carpenter

The paper uses CRISPRi screens to identify the lncRNA LOUP as a regulator of macrophage differentiation and inflammatory signaling through epigenetic and peptide-mediated mechanisms.

bioRxiv · Dec 19, 2023 · PreprintImmunology

The RNA binding protein, HNRNPA2B1, regulates IFNG signaling in macrophages

M. Mohammed Salih, C. G. Weindel, E. Malekos, L. Sudek, S. Katzman, C. J. Mabry, A. Coleman, S. Azam, R. O. Watson, K. L. Patrick, S. Carpenter

This study shows HNRNPA2B1 regulates IFNG signaling in macrophages by controlling IFNG receptor splicing and bacterial restriction.

bioRxiv · Oct 12, 2023 · PreprintImmunology

3D-intrusions transport active surface microbial assemblages to the dark ocean

M. A. Freilich, C. Poirier, M. Dever, E. Alou-Font, J. Allen, A. Cabornero, L. Sudek, C. J. Choi, S. Ruiz, A. Pascual, J. T. Farrar, T. M. S. Johnston, E. D'Asaro, A. Z. Worden, A. Mahadevan

The paper shows that ocean subduction creates 3D intrusions transporting surface microbial communities into the dark ocean, altering deep-sea microbial composition and carbon cycling.

bioRxiv · Sep 14, 2023Ecology