Author

M. Khalil

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Cancer Biology· 2 Biophysics· 1 Immunology· 1 Plant Biology· 1

Signature Assays, Organisms & Methods

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Approach:experimental assay· 3 Organism:human· 3 Assay:bulk RNA-seq· 2 Research Focus:cell type annotation· 2 Research Focus:differential expression· 2 Approach:statistical model· 2 Research Focus:cell signaling & trafficking· 1 Research Focus:chromatin & epigenetic regulation· 1

Frequent Co-Authors

A. Cagol· 1 shared A. Driouich· 1 shared A. G. Gonzalez· 1 shared A. Harvey· 1 shared A. Junker· 1 shared A. Krokida· 1 shared A. Lazaridou· 1 shared A. Mathias· 1 shared

Activity by Year

2021-2023 · peak 4/yr

Co-Author Collaboration Network

10 top collaborators · 18 mutual co-author links

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1 shared paperImmunology

A. Cagol

Mutual co-authors in cluster

Author profile →

5 papers

Recent·Most cited

Cell-binding IgM in CSF is distinctive of multiple sclerosis and targets the iron transporter SCARA5

I. Callegari, J. Oechtering, M. Schneider, S. Perriot, A. Mathias, M. Voortman, A. Cagol, U. Lanner, M. Diebold, S. Holdermann, V. Kreiner, B. Becher, C. Granziera, A. Junker, R. Du Pasquier, , T. Derfuss

The paper identifies cell-binding IgM in CSF that targets SCARA5 in multiple sclerosis, linking it to complement activation and T cell infiltration.

bioRxiv · Sep 29, 2023Immunology

A Clinically Useful and Biologically Informative Genomic Classifier for Papillary Thyroid Cancer

S. Craig, C. Stretch, F. Farshidfar, D. Sheka, N. Alabi, A. Siddiqui, K. Kopciuk, Y. J. Park, M. Khalil, F. M. Khan, A. Harvey, O. F. Bathe

The paper develops a genomic classifier for papillary thyroid cancer using machine learning, identifying molecular subtypes with distinct prognostic and therapeutic implications.

Frontiers in Endocrinology · Sep 12, 2023Peer-reviewedCancer Biology

Cleaving DNA with DNA: cooperative tuning of structure and reactivity driven by copper ions

S. C. Dantu, M. Khalil, M. Bria, C. Saint-Pierre, D. Gasparutto, G. Sicoli

The paper analyzes a copper-dependent DNAzyme using molecular dynamics and EPR/ESR spectroscopy to reveal structural and mechanistic details of its self-cleavage reaction.

bioRxiv · Jun 6, 2023Biophysics

Cell Population Growth Kinetics in the Presence of Stochastic Heterogeneity of Cell Phenotype

Y. Wang, J. X. Zhou, E. Pedrini, I. Rubin, M. Khalil, H. Qian, S. Huang

The paper measures growth kinetics of HL60 leukemia cell populations under stochastic phenotypic heterogeneity and develops a branching process model to explain observed variations.

bioRxiv · Feb 8, 2023Cancer Biology

A tomato prolyl-4-hydroxylase causes relocation of abscission zone and alters abscission kinetics

P. Kalaitzis, A. Perrakis, D. Denic, K. N. Blazakis, E. Giannoutsou, D. Kaloudas, C. E. Bita, M. Rizou, A. Krokida, M. Kouhen, A. Lazaridou, K. Mekkaoui, S. Belaidi, Z. E. Zein, M. Khalil, , N. Kalogerakis

This study shows that altering tomato SlP4H3 expression shifts the abscission zone position and modifies ethylene-induced abscission timing depending on the developmental stage.

bioRxiv · Apr 20, 2021 · PreprintPlant Biology