Author

R. Janssen

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

Click to filter author papers

Evolutionary Biology· 3 Cancer Biology· 2 Ecology· 2 Microbiology· 1

Signature Assays, Organisms & Methods

Click to filter · or open tag

Research Focus:cell type annotation· 3 Approach:experimental assay· 3 Organism:human· 3 Organism:mouse· 3 Approach:statistical model· 3 Assay:whole-genome sequencing· 3 Research Focus:clustering· 2 Approach:comparative / phylogenetic analysis· 2

Frequent Co-Authors

A. H. Ali· 2 shared A. T. Ford· 2 shared C. Fichtel· 2 shared C. H. Fleming· 2 shared E. Cuppen· 2 shared E. Kuijk· 2 shared J. Dekker· 2 shared J. L. Belant· 2 shared

Activity by Year

2019-2023 · peak 4/yr

Co-Author Collaboration Network

10 top collaborators · 24 mutual co-author links

Click any collaborator node to inspect or filter shared papers

Focal author (center)Selected co-authorORCID co-authorUnlinked name

Curved chords = mutual co-authorship

2 shared papersEcology

A. H. Ali

Mutual co-authors in cluster

Author profile →

8 papers

Recent·Most cited

Evolution of the spider homeobox gene repertoire by tandem and whole genome duplication

M. E. Aase-Remedios, R. Janssen, D. J. Leite, L. Sumner-Rooney, A. P. McGregor

The paper investigates the origin of duplicated homeobox genes in spiders, finding most are from a whole genome duplication, with evidence of subfunctionalisation in the NK cluster.

bioRxiv · May 26, 2023Evolutionary Biology

The search behavior of terrestrial mammals

M. J. Noonan, R. Martinez-Garcia, C. H. Fleming, B. Garcia De Figueiredo, A. H. Ali, N. Attias, J. L. Belant, D. E. Beyer, D. Berteaux, L. R. Bidner, R. B. Boone, S. Boutin, J. Brito, M. Brown, A. Carter, , M. Lashley

This study analyzes GPS data from 1,396 terrestrial mammals across 62 species to show how predator-prey dynamics influence movement strategies and resource search efficiency.

bioRxiv · Dec 31, 2022 · PreprintEcology

Clarifying space use concepts in ecology: range vs. occurrence distributions

J. M. Alston, C. H. Fleming, M. J. Noonan, M. A. Tucker, I. Silva, C. Folta, T. S. Akre, A. H. Ali, J. L. Belant, D. Beyer, N. Blaum, K. Boehning-Gaese, R. Cunha de Paula, J. Dekker, J. Drescher-Lehman, , W. F. Fagan

This paper distinguishes between range and occurrence distributions in ecology, showing that conflating them can lead to incorrect ecological inferences and conservation practices.

bioRxiv · Sep 29, 2022Ecology

A single origin of animal excretory organs

L. Gasiorowski, C. Andrikou, P. Bump, R. Janssen, G. E. Budd, C. J. Lowe, A. Hejnol

This study identifies a conserved molecular and structural basis for excretory organs across diverse animal species, suggesting a single evolutionary origin.

bioRxiv · Nov 15, 2020 · PreprintEvolutionary Biology

Embryonic expression patterns of panarthropod Teneurin-m/odd Oz genes suggest a possible function in segmentation

R. Janssen

The paper examines the expression patterns of Ten-m/odd Oz genes across multiple arthropods and an onychophoran, suggesting a potential role in segmentation.

bioRxiv · Sep 9, 2019 · PreprintEvolutionary Biology

An artificial neural network identifies glyphosate-impacted brackish communities based on 16S rRNA amplicon MiSeq read counts

R. Janssen, J. Zabel, U. von Lukas, M. Labrenz

This paper trains an artificial neural network to detect glyphosate-impacted microbial communities using 16S rRNA amplicon sequencing data and identifies key taxonomic clusters for classification.

bioRxiv · Jul 23, 2019 · PreprintMicrobiology

Mutational impact of chronic alcohol use on stem cells in cirrhotic liver

M. Jager, E. Kuijk, R. Lieshout, M. Locati, N. Besselink, B. van der Roest, R. Janssen, S. Boymans, J. de Jonge, J. IJzermans, M. Doukas, M. Verstegen, R. van Boxtel, L. van der Laan, E. Cuppen

This study investigates the mutational impact of chronic alcohol use on liver stem cells in cirrhotic livers and finds no alcohol-specific mutational signatures but identifies enriched oncogenic mutations in cancer genes.

bioRxiv · Jul 11, 2019 · PreprintCancer Biology

5-Fluorouracil treatment induces characteristic T>G mutations in human cancer

S. Christensen, B. vd Roest, N. Besselink, R. Janssen, S. Boymans, J. Martens, M.-L. Yaspo, P. Priestley, Center for Personalized Cancer Treatment, E. Kuijk, E. Cuppen, A. van Hoeck

This study shows that 5-FU treatment causes characteristic T>G mutations in cancer, similar to endogenous mutational signatures, and may increase secondary malignancy risk.

bioRxiv · Jun 25, 2019Cancer Biology