S. K. Burley

This paper summarizes a crash course on AI-driven protein structure prediction, highlighting its global reception and organizational insights.

The paper evaluates the confidence of individual amino acid residues in PDB macromolecular crystal structures using RSCC and compares it to AlphaFold2's pLDDT scores, finding RSCC better reflects experimental reliability.

The paper generates structural models of the SARS-CoV-2 Omicron variant bound to ACE2 and antibodies, revealing altered binding interfaces and neutralization escape mechanisms.

The paper describes a framework using targeted phage display to identify conserved epitopes on the SARS-CoV-2 Spike protein for universal vaccine development.

This paper designs and evaluates phage-based and AAVP-based vaccination strategies for SARS-CoV-2 that induce systemic antibody responses in mice, with potential for a cold-free supply chain.