Author

S. R. Bagde

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Biochemistry· 2 Cell Biology· 2

Signature Assays, Organisms & Methods

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Approach:experimental assay· 3 Research Focus:protein structure prediction· 2 Organism:yeast· 2 Organism:bacteria (other)· 1 Research Focus:cell signaling & trafficking· 1 Approach:contrastive learning· 1 Assay:cryo-EM· 1 Approach:deep learning· 1

Frequent Co-Authors

J. C. Fromme· 3 shared A. Krishnakumar· 1 shared B. Szakal· 1 shared D. Baker· 1 shared D. Barerro· 1 shared D. Branzei· 1 shared E. A. Miller· 1 shared E. C. Greene· 1 shared

Activity by Year

2021-2022 · peak 3/yr

Co-Author Collaboration Network

10 top collaborators · 45 mutual co-author links

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3 shared papersCell Biology

J. C. Fromme

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Author profile →

4 papers

Recent·Most cited

Cell BiologybioRxivSep 26, 2022

Activity-based directed evolution of a membrane editor in mammalian cells

R. Tei, S. R. Bagde, J. C. Fromme, J. M. Baskin

This paper develops a membrane editor using engineered phospholipase D variants to modify phospholipid composition in cells and in vitro.

DOI 10.1038/s41557-023-01214-0

mouseproteomics

𝕏 PostBluesky

Cell BiologybioRxivDec 20, 2021

Structure of a TRAPPII-Rab11 activation intermediate reveals GTPase substrate selection mechanisms

S. R. Bagde, J. C. Fromme

The paper presents cryoEM structures of the TRAPPII complex from budding yeast, revealing mechanisms of Rab11 specificity and nucleotide exchange.

DOI 10.1126/sciadv.abn7446

𝕏 PostBluesky

BiochemistrySciencePeer-reviewedDec 10, 2021

Structures of core eukaryotic protein complexes

I. R. Humphreys, J. Pei, M. Baek…·D. Baker

The paper uses coevolution analysis and deep learning to model core eukaryotic protein complexes in yeast, identifying 104 new assemblies and structurally characterizing 608 previously unknown complexes.

DOI 10.1126/science.abm4805

yeastprotein structure

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BiochemistrybioRxivApr 8, 2021

Filament dynamics driven by ATP hydrolysis modulates membrane binding of the bacterial actin MreB

V. Pande, N. Mitra, S. R. Bagde…·P. Gayathri

This study shows that ATP hydrolysis modulates MreB filament dynamics and membrane binding, affecting filament length, bundling, and curvature-dependent orientation.

DOI 10.1083/jcb.202106092

bacteria (other)experimental assay

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