Author

S. S. Shinde

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Evolutionary Biology· 4

Signature Assays, Organisms & Methods

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Research Focus:chromatin & epigenetic regulation· 2 Approach:experimental assay· 2 Organism:mouse· 2 Organism:rat· 2 Research Focus:benchmarking· 1 Research Focus:cell signaling & trafficking· 1 Research Focus:cell type annotation· 1 Research Focus:database / resource· 1

Frequent Co-Authors

N. Vijay· 3 shared L. Teekas· 2 shared S. Sharma· 2 shared A. B. Patil· 1 shared A. Patwardhan· 1 shared A. Sharma· 1 shared K. CG· 1 shared M. Watve· 1 shared

Activity by Year

2019-2021 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 17 mutual co-author links

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3 shared papersEvolutionary Biology

N. Vijay

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4 papers

Recent·Most cited

Evolutionary BiologybioRxivJun 9, 2021

Recurrent erosion of COA1/MITRAC15 demonstrates gene dispensability in oxidative phosphorylation

S. S. Shinde, S. Sharma, L. Teekas…·N. Vijay

The paper shows recurrent gene loss and structural changes in COA1/MITRAC15 in species with glycolytic muscle fiber dominance, linking it to oxidative phosphorylation dispensability.

DOI 10.1038/s41598-021-04077-y

mouserat

𝕏 PostBluesky

Evolutionary BiologybioRxivDec 15, 2020

The ratio versus difference optimization and its implications for optimality theory

S. S. Shinde, A. Patwardhan, M. Watve

The paper compares ratio and difference optimization models, identifying conditions under which each is appropriate and applies them to various biological and economic examples.

DOI 10.1111/evo.14605

𝕏 PostBluesky

Evolutionary BiologybioRxivMar 3, 2020

CoalQC - Quality control while inferring demographic histories from genomic data: Application to forest tree genomes

A. B. Patil, S. S. Shinde, R. S…·N. Vijay

The paper introduces CoalQC, a pipeline for quality control in genomic data to improve demographic history inference, showing that assembly quality and repeat regions affect results in forest trees.

DOI 10.1016/j.gene.2020.145214

plant (other)whole-genome sequencing

𝕏 PostBluesky

Evolutionary BiologybioRxivJul 24, 2019

Signatures of relaxed selection in the CYP8B1 gene of birds and mammals

S. S. Shinde, L. Teekas, S. Sharma, N. Vijay

The paper screens CYP8B1 gene sequences across 200+ species to identify relaxed selection linked to dietary changes in birds and mammals.

DOI 10.1007/s00239-019-09903-6

mousehuman

𝕏 PostBluesky