Author
V. Gradinaru
Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.
Biology Disciplines
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2019-2024 · peak 4/yrCo-Author Collaboration Network
10 top collaborators · 32 mutual co-author links12 papers
Recent·Most cited
- BioengineeringNature CommunicationsPeer-reviewedDOI 10.1038/s41467-024-52149-0
- BioengineeringbioRxiv
Spatial genomics of AAVs reveals mechanism of transcriptional crosstalk that enables targeted delivery of large genetic cargo
G. M. Coughlin, M. Borsos, N. Appling…·V. Gradinaru
The paper identifies transcriptional crosstalk between enhancers and promoters delivered by AAVs, showing concatemer formation enables targeted delivery of large genetic cargo for cell-type-specific gene editing.
DOI 10.1038/s41587-025-02565-4 - BioengineeringbioRxiv
Primate-conserved Carbonic Anhydrase IV and murine-restricted Ly6c1 are new targets for crossing the blood-brain barrier
T. F. Shay, E. E. Sullivan, X. Ding…·V. Gradinaru
The paper identifies two new receptors, Ly6c1 and Car4/CA4, for crossing the blood-brain barrier using AAV vectors and computational modeling.
- BioengineeringbioRxiv
Functional gene delivery to and across brain vasculature of systemic AAVs with endothelial-specific tropism in rodents and broad tropism in primates
X. Chen, D. A. Wolfe, D. Sivadasan Bindu…·V. Gradinaru
The paper develops AAV vectors with endothelial-specific tropism for brain delivery in rodents and broad tropism in primates, demonstrating their utility in genetic engineering of the blood-brain barrier.
- BioengineeringbioRxiv
Fast, accurate ranking of engineered proteins by receptor binding propensity using structure modeling
X. Ding, X. Chen, E. E. Sullivan…·V. Gradinaru
This paper introduces APPRAISE, a method that rapidly ranks engineered proteins by their receptor binding propensity using structure modeling, demonstrating its accuracy on various protein classes.
DOI 10.1016/j.ymthe.2024.04.003 - PhysiologybioRxiv
A prebiotic diet modulates microglial states and motor deficits in α-synuclein overexpressing mice
R. Abdel-Haq, J. C. M. Schlachetzki, J. C. Boktor…·S. K. Mazmanian
A prebiotic diet reduces motor deficits and microglial activation in α-synuclein overexpressing mice by altering gut microbiota and microglial states.
DOI 10.7554/elife.81453 - BioengineeringbioRxiv
Intravenous gene transfer throughout the brain of infant Old World primates using AAV
M. R. Chuapoco, N. Flytzanis, N. Goeden…·V. Gradinaru
This paper introduces AAV.CAP-Mac, an engineered AAV variant that enables efficient systemic brain-wide gene delivery in infant Old World primates.
- BiophysicsbioRxiv
Multi-Wavelength Analytical Ultracentrifugation of Biopolymer Mixtures and Interactions
A. Henrickson, G. E. Gorbet, A. Savelyev…·B. Demeler
The paper demonstrates the utility of multi-wavelength analytical ultracentrifugation for analyzing complex biopolymer mixtures and interactions.
DOI 10.1016/j.ab.2022.114728 - BioengineeringFrontiers in ImmunologyPeer-reviewed
Deep parallel characterization of AAV tropism and AAV-mediated transcriptional changes via single-cell RNA sequencing
D. Brown, M. Altermatt, T. Dobreva…·V. Gradinaru
The paper develops a scRNA-seq pipeline to characterize AAV tropism and transcriptional responses at single-cell resolution, revealing cell-type-specific targeting and gene expression changes.
- PhysiologybioRxiv
Peripheral Neuronal Activation Shapes the Microbiome and Alters Gut Physiology
J. A. Griffiths, B. B. Yoo, P. Thuy-Boun…·S. Mazmanian
This study activates specific gut neurons in mice to show they influence microbiome structure and gut physiology, including bile acids and fecal output, without brain signals.
DOI 10.1016/j.celrep.2024.113953 - BioengineeringbioRxiv
Broad gene expression throughout the mouse and marmoset brain after intravenous delivery of engineered AAV capsids
N. C. Flytzanis, N. Goeden, D. Goertsen…·V. Gradinaru
The paper identifies AAV capsid variants that target the brain with high specificity and avoid liver expression in mice and marmoset non-human primates.
DOI 10.1038/s41593-021-00969-4 - BioengineeringbioRxiv
Machine learning-guided channelrhodopsin engineering enables minimally-invasive optogenetics
C. N. Bedbrook, K. K. Yang, J. E. Robinson…·F. H. Arnold
The paper engineers light-gated channelrhodopsins with high photocurrent and light sensitivity, enabling minimally-invasive optogenetics without invasive surgery or implants.
DOI 10.1038/s41592-019-0583-8