Author

C.-W. Hsu

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Plant Biology· 3 Cell Biology· 1 Evolutionary Biology· 1

Signature Assays, Organisms & Methods

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Organism:Arabidopsis· 4 Research Focus:cell type annotation· 4 Research Focus:differential expression· 3 Approach:experimental assay· 3 Assay:scRNA-seq· 3 Research Focus:development & morphogenesis· 2 Research Focus:gene regulatory network inference· 2 Approach:statistical model· 2

Frequent Co-Authors

I. W. Taylor· 3 shared P. N. Benfey· 3 shared U. Ohler· 3 shared R. Shahan· 2 shared T. M. Nolan· 2 shared A. Afanassiev· 1 shared A. Brosnan· 1 shared A. H. C. Vlot· 1 shared

Activity by Year

2018-2022 · peak 3/yr

Co-Author Collaboration Network

10 top collaborators · 32 mutual co-author links

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3 shared papersPlant Biology

I. W. Taylor

Mutual co-authors in cluster

Author profile →

5 papers

Recent·Most cited

Brassinosteroid gene regulatory networks at cellular resolution

T. M. Nolan, N. Vukasinovic, C.-W. Hsu, J. Zhang, I. Vanhoutte, R. Shahan, I. W. Taylor, L. Greenstreet, M. Heitz, A. Afanassiev, P. Wang, P. Szekely, A. Brosnan, Y. Yin, G. Schiebinger, , P. N. Benfey

The paper identifies BR-responsive gene expression in Arabidopsis root cells using single-cell RNA-sequencing and reveals HAT7 and GTL1 as transcription factors regulating cell elongation.

bioRxiv · Sep 16, 2022 · PreprintPlant Biology

Arabidopsis uses a molecular grounding mechanism and a biophysical circuit breaker to limit floral abscission signaling

I. W. Taylor, O. R. Patharkar, C.-W. Hsu, J. Baer, M. Mijar, C. E. Niederhuth, U. Ohler, P. N. Benfey, J. C. Walker

This study identifies MKP1 as a negative regulator of the HAE/HSL2 abscission pathway in Arabidopsis and shows how IDA expression patterns act as a biophysical circuit breaker to terminate signaling.

bioRxiv · Jul 14, 2022Plant Biology

Live cell biosensors based on the fluorescence lifetime of environment-sensing dyes

B. Mehl, L. Li, E. Hinde, B. Liu, C. J. MacNevin, C.-W. Hsu, E. Gratton, K. M. Hahn

This study develops a FLIM biosensor using merocyanine dyes to detect conformational changes in Cdc42, showing improved sensitivity at low activation levels compared to FRET-based methods.

bioRxiv · Feb 8, 2022Cell Biology

A single cell Arabidopsis root atlas reveals developmental trajectories in wild type and cell identity mutants

R. Shahan, C.-W. Hsu, T. M. Nolan, B. J. Cole, I. W. Taylor, A. H. C. Vlot, P. N. Benfey, U. Ohler

The paper constructs a single-cell atlas of Arabidopsis root development and identifies an alternative pathway for endodermal identity specification in mutants.

bioRxiv · Jun 29, 2020 · PreprintPlant Biology

On the post-glacial spread of human commensal Arabidopsis thaliana: journey to the east

C.-W. Hsu, C.-Y. Lo, C.-R. Lee

The paper analyzes genetic variation in Arabidopsis thaliana to trace its post-glacial spread, finding complex demographic patterns and gene flow between non-relict and relict populations in Eurasia.

bioRxiv · Sep 7, 2018Evolutionary Biology