Author

D. D. Kim

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Microbiology· 3 Bioengineering· 1 Scientific Communication & Education· 1

Signature Assays, Organisms & Methods

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Approach:experimental assay· 4 Research Focus:host-pathogen & immune response· 2 Assay:metagenomics· 2 Research Focus:benchmarking· 1 Research Focus:cell type annotation· 1 Research Focus:gene regulatory network inference· 1 Organism:mouse· 1 Approach:statistical model· 1

Frequent Co-Authors

S. Yoon· 3 shared J. Chang· 2 shared M. J. Song· 2 shared T. Yun· 2 shared A. Gaharwar· 1 shared A. Ho· 1 shared A. Panzer· 1 shared C. L. O'Neill· 1 shared

Activity by Year

2018-2024 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 15 mutual co-author links

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3 shared papersMicrobiology

S. Yoon

Mutual co-authors in cluster

Author profile →

5 papers

Recent·Most cited

Selective enrichment of Methylococcaceae versus Methylocystaceae methanotrophs via control of methane feeding scheme

J. Y. Lee, M. Choi, M. J. Song, D. D. Kim, T. Yun, J. Chang, A. Ho, J. Myung, S. Yoon

This study enriches methanotrophic microbiomes from paddy soils under different methane and copper conditions, finding Methylocystis dominance and ecological importance of methanobactin in Cu-deficient environments.

bioRxiv · Mar 18, 2024 · PreprintMicrobiology

Coiled Coil Crosslinked Alginate Hydrogels Dampen Macrophage-Driven Inflammation

Z. Clapacs, C. L. O'Neill, P. Shrimali, G. Lokhande, M. Files, D. D. Kim, A. Gaharwar, J. S. Rudra

This paper develops coiled coil crosslinked alginate hydrogels that reduce macrophage-driven inflammation compared to calcium crosslinked gels.

bioRxiv · Nov 1, 2021Bioengineering

Enhancement of nitrous oxide emissions in soil microbial consortia via copper competition between proteobacterial methanotrophs and denitrifiers

J. Chang, D. D. Kim, J. D. Semrau, J. Lee, H. Heo, W. Gu, S. Yoon

This study shows that copper competition between methanotrophs and denitrifiers in rice paddy soils increases nitrous oxide emissions through methanobactin-mediated copper sequestration.

bioRxiv · Sep 21, 2020Microbiology

Quantification of nosZ genes and transcripts in activated sludge microbiomes with novel group-specific qPCR methods validated with metagenomic analyses

D. D. Kim, D. Park, H. Yoon, M. J. Song, T. Yun, S. Yoon

The paper develops and validates group-specific qPCR methods for quantifying nosZ genes and transcripts in activated sludge microbiomes using metagenomic analysis.

bioRxiv · Jan 6, 2020Microbiology

Adherence to the iDSI reference case among published cost-per-DALY averted studies

J. Emerson, A. Panzer, J. T. Cohen, K. Chalkidou, Y. Teerawattananon, M. Sculpher, T. Wilkinson, D. Walker, P. J. Neumann, D. D. Kim

This study evaluates adherence to the iDSI reference case guidelines in cost-per-DALY averted studies from 2011 to 2017, finding improved reporting standards but no significant methodological improvement.

bioRxiv · Oct 1, 2018Scientific Communication & Education