Author

D. Schapiro

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Cancer Biology· 2 Immunology· 1 Pathology· 1

Signature Assays, Organisms & Methods

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Organism:human· 4 Research Focus:cell type annotation· 3 Approach:experimental assay· 2 Assay:imaging· 2 Assay:spatial transcriptomics· 2 Approach:biophysical modeling· 1 Research Focus:cell signaling & trafficking· 1 Research Focus:clustering· 1

Frequent Co-Authors

J. Muhlich· 2 shared P. K. Sorger· 2 shared A. Claas· 1 shared A. M. Haberman· 1 shared A. Sokolov· 1 shared C. Chidley· 1 shared C. D. Nicora· 1 shared C. Parravicini· 1 shared

Activity by Year

2018-2020 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 19 mutual co-author links

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2 shared papersCancer Biology

J. Muhlich

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Author profile →

4 papers

Recent·Most cited

Channel Embedding for Informative Protein Identification from Highly Multiplexed Images

S. A. Magid, W.-D. Jang, D. Schapiro, D. Wei, J. Tompkin, P. K. Sorger, H. Pfister

This paper introduces a channel embedding method for interpreting highly multiplexed biomedical images, demonstrating its effectiveness on synthetic data and breast cancer cell images.

bioRxiv · Mar 24, 2020 · PreprintPathology

Sporadic ERK pulses drive non-genetic resistance in drug-adapted BRAFV600E melanoma cells

L. Gerosa, C. Chidley, F. Froehlich, G. Sanchez, S. K. Lim, J. Muhlich, J.-Y. Chen, G. J. Baker, D. Schapiro, T. Shi, L. Yi, C. D. Nicora, A. Claas, D. A. Lauffenburger, W.-J. Qian, , P. K. Sorger

The paper shows that sporadic ERK pulses in BRAFV600E melanoma cells drive non-genetic resistance to RAF/MEK inhibitors.

bioRxiv · Sep 8, 2019Cancer Biology

Highly multiplexed immunofluorescence images and single-cell data of immune markers in tonsil and lung cancer

R. Rashid, G. Gaglia, Y.-A. Chen, J.-R. Lin, Z. Du, Z. Maliga, D. Schapiro, C. Yapp, J. Muhlich, A. Sokolov, P. Sorger, S. Santagata

The paper describes a dataset of multiplexed immunofluorescence images and single-cell immune marker data from human tonsil and lung cancer tissues, along with analysis methods and tools.

bioRxiv · Jul 17, 2019Cancer Biology

The landscape of S100B+ and HLA-DR+ dendritic cell subsets in tonsils at the single cell level via high-parameter mapping

M. M. Bolognesi, F. M. Bosisio, M. Manzoni, D. Schapiro, R. Tagliabue, M. Faretta, C. Parravicini, A. M. Haberman, G. Cattoretti

The paper identifies and characterizes novel dendritic cell subsets in tonsils using high-parameter imaging and bioinformatics, revealing spatial interactions with T and B cells.

bioRxiv · Jul 16, 2018 · PreprintImmunology