Author

J. Vicente

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Microbiology· 3 Bioengineering· 1 Cell Biology· 1 Evolutionary Biology· 1 Plant Biology· 1

Signature Assays, Organisms & Methods

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Approach:experimental assay· 4 Organism:yeast· 3 Research Focus:host-pathogen & immune response· 2 Assay:metagenomics· 2 Approach:statistical model· 2 Organism:Arabidopsis· 1 Assay:bulk RNA-seq· 1 Research Focus:cell type annotation· 1

Frequent Co-Authors

A. Santos· 3 shared B. Benitez-Dominguez· 2 shared I. Belda· 2 shared J. Ruiz· 2 shared M. de Celis· 2 shared A. Barroso· 1 shared A. Gopinath· 1 shared A. H. Futerman· 1 shared

Activity by Year

2019-2024 · peak 3/yr

Co-Author Collaboration Network

10 top collaborators · 21 mutual co-author links

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3 shared papersMicrobiology

A. Santos

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Author profile →

7 papers

Recent·Most cited

Pervasive mitochondrial tRNA gene loss in the clade B of haplosclerid sponges (Porifera, Demospongiae).

D. V. Lavrov, T. L. Turner, J. Vicente

The paper shows that Clade B of Haplosclerid Sponges (CBHS) exhibit widespread loss of mitochondrial tRNA genes, contrasting with the stable gene content seen in most bilaterian animals.

bioRxiv · Mar 4, 2024Evolutionary Biology

Multi-omics framework to reveal the molecular determinants of fermentation performance in wine yeast populations

M. de Celis, J. Ruiz, B. Benitez-Dominguez, J. Vicente, S. Tomasi, S. Izquierdo-Gea, N. Rozes, C. Ruiz-de-Vila, J. Gombau, F. Zamora, A. Barroso, L. C. Terron-Camero, E. Andres-Leon, A. Santos, I. Belda

The paper develops a multi-omics framework to identify molecular factors influencing fermentation performance in wine yeast communities, finding that yeast dominance drives metabolite profiles and transcriptomic activity.

bioRxiv · Dec 2, 2023Microbiology

Predictability of the community-function landscape in wine yeast ecosystems

J. Ruiz, M. de Celis, J. Diaz-Colunga, J. C. C. Vila, B. Benitez-Dominguez, J. VICENTE, A. Santos, A. Sanchez, I. Belda

The paper predicts community function in wine yeast ecosystems by linking taxonomy to enological traits and showing quantitative rules govern strain contributions to fermentation.

Molecular Systems Biology · Sep 12, 2023Peer-reviewedMicrobiology

DNA nanopores as artificial membrane channels for origami based bioelectronics

L. Luo, S. Manda, Y. Park, B. Demir, J. Vicente, M. P. Anantram, E. E. Oren, A. Gopinath, M. Rolandi

The paper develops DNA nanopores integrated with bioprotonic contacts to create efficient artificial ion-channel interfaces for bioelectronic signal readout.

bioRxiv · Mar 1, 2023 · PreprintBioengineering

Multilocus typing of Lachancea thermotolerans for wine fermentation monitoring

J. Vicente, E. Navascues, S. Benito, D. Marquina, A. Santos

This paper develops a multiplexed microsatellite amplification method for genotyping Lachancea thermotolerans strains to monitor fermentation and strain implantation in winemaking.

bioRxiv · Dec 12, 2022 · PreprintMicrobiology

Cholesteryl Hemiazelate Induces Lysosome Dysfunction and Exocytosis in Macrophages

N. Domingues, R. D. A. Calado, P. Brito, R. Matthiesen, J. Ramalho, M. I. L. Soares, T. Pereira, L. Oliveira, J. Vicente, L. H. Wong, S. M. Cho, I. Simoes, J. Sampaio, C. Klose, M. A. Surma, , O. V. Vieira

This study identifies cholesteryl hemiazelate as a cause of lysosome dysfunction and exocytosis in macrophages, contributing to atherosclerosis.

bioRxiv · Jan 5, 2021 · PreprintCell Biology

Ethylene-mediated nitric oxide depletion pre-adapts plants to hypoxia stress

S. Hartman, Z. Liu, H. van Veen, J. Vicente, E. Reinen, S. Martopawiro, H. Zhang, N. van Dongen, F. Bosman, G. W. Bassel, E. J. W. Visser, J. Bailey-Serres, F. L. Theodoulou, K. H. Hebelstrup, D. J. Gibbs, , L. A. C. J. Voesenek

The paper shows that ethylene-mediated nitric oxide depletion pre-adapts plants to hypoxia stress by stabilizing ERFVII transcription factors.

bioRxiv · Jul 17, 2019Plant Biology