Author

K. Cockburn

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Cell Biology· 3

Signature Assays, Organisms & Methods

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Organism:mouse· 3 Research Focus:cell type annotation· 2 Approach:experimental assay· 2 Assay:bulk RNA-seq· 1 Research Focus:cell-cell communication· 1 Research Focus:clustering· 1 Approach:deep learning· 1 Research Focus:development & morphogenesis· 1

Frequent Co-Authors

V. Greco· 3 shared K. Kawaguchi· 2 shared A. Schmitter· 1 shared C. M. Pineda· 1 shared C. Matte-Martone· 1 shared D. G. Gonzalez· 1 shared D. P. May· 1 shared E. A. Lathrop· 1 shared

Activity by Year

2021-2022 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 37 mutual co-author links

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3 shared papersCell Biology

V. Greco

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3 papers

Recent·Most cited

Cell BiologyNature Cell BiologyPeer-reviewedNov 10, 2022

Gradual differentiation uncoupled from cell cycle exit generates heterogeneity in the epidermal stem cell layer.

K. Cockburn, K. Annusver, S. Ganesan…·V. Greco

The paper shows that epidermal stem cells undergo gradual differentiation without exiting the cell cycle, generating heterogeneity in the stem cell layer.

DOI 10.1038/s41556-022-01021-8

mousebulk RNA-seq

𝕏 PostBluesky

Cell BiologybioRxivJun 23, 2021

Probing the rules of cell coordination in live tissues by interpretable machine learning based on graph neural networks

T. Yamamoto, K. Cockburn, V. Greco, K. Kawaguchi

The paper uses graph neural networks to infer cell coordination rules from live tissue data, revealing region-specific coordination patterns in mammalian epidermis.

DOI 10.1371/journal.pcbi.1010477

mousespatial transcriptomics

𝕏 PostBluesky

Cell BiologybioRxivJan 8, 2021

Skin-resident immune cells actively coordinate their distribution with epidermal cells during homeostasis

S. Park, C. Matte-Martone, D. G. Gonzalez…·V. Greco

The paper tracks immune cells in live mice to show they maintain a tiling pattern with epithelial cells during homeostasis, regulated by epithelial density and Rac1.

DOI 10.1038/s41556-021-00670-5

mouseimaging

𝕏 PostBluesky