W. Schmidt

Kilohertz volumetric imaging of in-vivo dynamics using squeezed light field microscopy

This paper introduces squeezed light field microscopy (SLIM), a method for high-speed 3D volumetric imaging, and demonstrates its application in tracking blood cell motion and neural activity in vivo.

The interactome of histone deacetylase HDA19 in dark-grown Arabidopsis seedlings

The paper presents an interactome dataset of HDA19 in Arabidopsis seedlings derived from IP-based analysis, offering a resource for studying its interacting partners.

Transcriptome and translatome comparison of tissues from Arabidopsis thaliana

The paper compares transcriptome and translatome data from Arabidopsis thaliana shoots and roots to assess translation efficiency of protein-coding and lncRNA transcripts.

Protein Phosphorylation Orchestrates Acclimations of Arabidopsis Plants to Environmental pH

This study identifies pH-dependent phosphorylation sites in Arabidopsis plants exposed to acidic or alkaline pH, revealing post-translational regulation of pH homeostasis and acclimation mechanisms.

Alkalinity modulates a unique suite of genes to recalibrate growth and pH homeostasis

This study identifies pH-sensitive genes in plants grown under varying alkaline conditions and reveals their role in growth and pH homeostasis.

Functional traits trade-offs define plant population stability worldwide

The paper examines global plant population stability by linking trait trade-offs to inter-annual variability in species abundance across multiple ecosystems.

ReSurveyGermany: Vegetation-plot time-series over the past hundred years in Germany

The paper compiles and harmonizes vegetation-plot resurvey data from Germany over almost 100 years, enabling analysis of biodiversity change and species distribution shifts.

Insertion of YFP at P5CS1 and AFL1 shows the potential, and potential complications, of gene tagging for functional analyses of stress-related proteins

The paper uses gene tagging in Arabidopsis to study stress-related proteins, showing both its utility and potential to disrupt gene expression.

LOTVS: a global collection of permanent vegetation plots

LOTVS provides a global collection of vegetation time-series from permanent plots to study ecological changes over time.

Genomically hardwired regulation of gene activity orchestrates cellular iron homeostasis in Arabidopsis

The paper shows that gene activity in Arabidopsis under Fe deficiency is regulated by transcription and alternative splicing, with genomic features influencing which regulatory mode is used.

Chromatin enrichment for Proteomics in Plants (ChEP-P) implicates the histone reader ALFIN-LIKE 6 in jasmonate signalling

This study identifies ALFIN-LIKE 6 as a histone reader involved in jasmonate signaling in Arabidopsis by modulating chromatin dynamics and protein abundance through a modified ChEP-P approach.

IRONMAN Tunes Responses to Iron Deficiency in Concert with Environmental pH

Ectopic expression of IRONMAN peptides improves plant growth on calcareous soils by inducing Fe-mobilizing compound biosynthesis in response to elevated pH.

Fine tuning cyclic-di-GMP signaling in Pseudomonas aeruginosa using the type 4 pili alignment complex

This paper identifies PilO's role in modulating SadC activity to regulate cyclic-di-GMP levels and biofilm formation in Pseudomonas aeruginosa.

pH-Dependent Transcriptional Profile Changes in Iron-Deficient Arabidopsis Roots

This study examines how pH affects the transcriptional response to iron deficiency in Arabidopsis roots using RNA-seq, identifying pH-dependent gene expression changes and their functional implications.

IRON MAN, a ubiquitous family of peptides that control iron transport in plants

The paper identifies IMA peptides as essential for iron transport in plants, showing their role in Fe uptake and their expression pattern in phloem.