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Molecular BiologyNature Communications
Peer-reviewed journal article

Time-resolved cryo-EM visualizes ribosomal translocation with EF-G and GTP

Christine E. CarboneiD, A.B. LovelandiD, Howard GamperiD, Ya‐Ming HouiD, Gabriel DemoiD, Andrei A. KorosteleviD

Abstract

During translation, a conserved GTPase elongation factor--EF-G in bacteria or eEF2 in eukaryotes--translocates tRNA and mRNA through the ribosome. EF-G has been proposed to act as a flexible motor that propels tRNA and mRNA movement, as a rigid pawl that biases unidirectional translocation resulting from ribosome rearrangements, or by various combinations of motor- and pawl-like mechanisms. Using time-resolved cryo-EM, we visualized GTP-catalyzed translocation without inhibitors, capturing elusive structures of ribosome*EF-G intermediates at near-atomic resolution. Prior to translocation, EF-G binds near peptidyl-tRNA, while the rotated 30S subunit stabilizes the EF-G GTPase center. Reverse 30S rotation releases Pi and translocates peptidyl-tRNA and EF-G by [~]20 [A]. An additional 4-[A] translocation initiates EF-G dissociation from a transient ribosome state with highly swiveled 30S head. The structures visualize how nearly rigid EF-G rectifies inherent and spontaneous ribosomal dynamics into tRNA-mRNA translocation, whereas GTP hydrolysis and Pi release drive EF-G dissociation.

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