Author

A. Giri

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Cancer Biology· 2 Plant Biology· 2 Bioengineering· 1 Genetics· 1

Signature Assays, Organisms & Methods

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Approach:statistical model· 4 Research Focus:cell type annotation· 3 Approach:experimental assay· 3 Organism:human· 3 Research Focus:clustering· 2 Research Focus:GWAS / association mapping· 2 Assay:GWAS summary statistics· 2 Assay:imaging· 2

Frequent Co-Authors

A. Agrawal· 1 shared A. Johnston· 1 shared A. Melnick· 1 shared A. Miriyala· 1 shared A. R. Fiyaz· 1 shared A. S. Hariprasad· 1 shared A. U. Jackson· 1 shared A. V. Kumar· 1 shared

Activity by Year

2017-2022 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 18 mutual co-author links

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1 shared paperBioengineering

A. Agrawal

Mutual co-authors in cluster

Author profile →

6 papers

Recent·Most cited

Profiling Dynamic Patterns of Single-cell Motility

D. Maity, N. Sivakumar, P. Kamat, N. Zamponi, C. Min, W. Du, H. Jayatilaka, A. Giri, A. Johnston, B. Starich, M. Karl, A. Agrawal, D. Riley, L. Venturitti, A. Melnick, , J. M. Phillip

This study introduces CaMI, a framework to classify single-cell motility patterns, revealing heterogeneity and dynamics not captured by traditional ensemble methods.

bioRxiv · Sep 21, 2022Bioengineering

Elucidating the patterns of pleiotropy and its biological relevance in maize

M. B. Khaipho-Burch, T. Ferebee, A. Giri, G. P. Ramstein, B. Monier, E. Yi, C. Romay, E. S. Buckler

This study investigates pleiotropy in maize using GWAS data across 120,597 traits, finding limited evidence of widespread biological pleiotropy.

bioRxiv · Jul 20, 2022 · PreprintPlant Biology

Single-cell analysis of patient-derived PDAC organoids reveals cell state heterogeneity and a conserved developmental hierarchy

T. G. Krieger, S. LeBlanc-Soto, J. Jabs, F. W. Ten, N. Ishaque, K. Jechow, O. Debnath, C.-S. Leonhardt, A. Giri, R. Eils, O. Strobel, C. Conrad

The paper uses single-cell RNA sequencing to analyze PDAC organoids and identifies conserved cell states and a differentiation hierarchy linked to tumor subtypes.

bioRxiv · Aug 23, 2020Cancer Biology

The role of integrin αv and CD44 in GBM migration in human brain

Z. A. Binder, S. H. J. Kim, P.-H. Wu, A. Giri, G. L. Gallia, C. A. Pardo, D. Wirtz

This study uses human organotypic brain slices to examine GBM cell motility, finding that CD44 knockdown reduces motility more than ITGAV knockdown.

bioRxiv · Nov 16, 2019 · PreprintCancer Biology

Marker-assisted pyramiding of two major broad-spectrum bacterial blight resistance genes, Xa21 and Xa33 into an elite maintainer line of rice, DRR17B

B. CH, B. S. Naik, A. V. Kumar, H. G, M. H. Swamy, H. S. Masood, D. T. Kumar, A. Miriyala, R. Kale, Y. A, K. Pranathi, M. B. Koushik, S. Kota, V. Bhadana, A. S. Hariprasad, , R. M. Sundram

This study pyramids two bacterial blight resistance genes, Xa21 and Xa33, into the rice line DRR17B using marker-assisted backcross breeding, resulting in lines with durable resistance and agronomic traits similar to the parent.

bioRxiv · Jul 13, 2018Plant Biology

Genetic analysis of over one million people identifies 535 novel loci for blood pressure.

E. Evangelou, H. R. Warren, D. Mosen-Ansorena, B. Mifsud, R. Pazoki, H. Gao, G. Ntritsos, N. Dimou, C. P. Cabrera, I. Karaman, F. L. Ng, M. Evangelou, K. Witkowska, E. Tzanis, J. N. Hellwege, , Verwe

This study identifies 535 novel genetic loci associated with blood pressure traits in over one million individuals of European ancestry.

bioRxiv · Oct 11, 2017 · PreprintGenetics