Author

E. Yi

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Cancer Biology· 2 Ecology· 2 Bioengineering· 1 Plant Biology· 1

Signature Assays, Organisms & Methods

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Research Focus:cell type annotation· 3 Approach:experimental assay· 3 Assay:bulk RNA-seq· 2 Research Focus:differential expression· 2 Research Focus:host-pathogen & immune response· 2 Organism:human· 2 Assay:imaging· 2 Organism:plant (other)· 2

Frequent Co-Authors

H. Kim· 3 shared C. W. Wood· 2 shared K. C. Johnson· 2 shared S. Das· 2 shared A. Buxton-Martin· 1 shared A. D. Gujar· 1 shared A. Giri· 1 shared A. W. Cheng· 1 shared

Activity by Year

2020-2024 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 15 mutual co-author links

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3 shared papersCancer Biology

H. Kim

Mutual co-authors in cluster

Author profile →

6 papers

Recent·Most cited

Variation in a microbial mutualist has transcriptional and phenotypic consequences for host-parasite interactions

A. Buxton-Martin, E. Gluck-Thaler, E. Yi, J. R. Stinchcombe, C. W. Wood

The paper examines how genetic variation in rhizobial bacteria affects host plant responses to parasitic nematodes, revealing transcriptomic and phenotypic differences.

bioRxiv · Jul 15, 2024Ecology

Mutualist-Provided Resources Increase Susceptibility to Parasites

E. Yi, N. Meng, C. W. Wood

The paper tests two hypotheses for why mutualistic microbes increase host susceptibility to parasites and finds that resource availability, not mutualism establishment, drives increased infection.

bioRxiv · Oct 15, 2023 · PreprintEcology

IMPASTO: Multiplexed cyclic imaging without signal removal via self-supervised neural unmixing

H. Kim, S. Bae, J. Cho, H. Nam, J. Seo, S. Han, E. Yi, E. Kim, Y.-G. Yoon, J.-B. Chang

IMPASTO enables erasureless cyclic imaging for multiplexed spatial proteomics through self-supervised neural unmixing, achieving 30-plex imaging with reduced tissue distortion.

bioRxiv · Nov 22, 2022 · PreprintBioengineering

Elucidating the patterns of pleiotropy and its biological relevance in maize

M. B. Khaipho-Burch, T. Ferebee, A. Giri, G. P. Ramstein, B. Monier, E. Yi, C. Romay, E. S. Buckler

This study investigates pleiotropy in maize using GWAS data across 120,597 traits, finding limited evidence of widespread biological pleiotropy.

bioRxiv · Jul 20, 2022 · PreprintPlant Biology

Live-cell imaging shows uneven segregation of extrachromosomal DNA elements and transcriptionally active extrachromosomal DNA clusters in cancer

E. Yi, A. D. Gujar, M. Guthrie, H. Kim, K. C. Johnson, S. B. Amin, S. Das, P. A. Clow, A. W. Cheng, R. G. Verhaak

The paper uses live-cell imaging to show uneven ecDNA segregation and transcriptional clustering in cancer cells, explaining ecDNA accumulation and oncogenesis.

bioRxiv · Oct 20, 2020 · PreprintCancer Biology

Single-cell multimodal glioma analyses reveal epigenetic regulators of cellular plasticity and environmental stress response

K. C. Johnson, K. J. Anderson, E. T. Courtois, F. Barthel, F. S. Varn, D. Luo, M. Seignon, E. Yi, H. Kim, M. Estecio, M. Tang, N. Navin, R. Maurya, C. Ngan, N. Verburg, , R. Verhaak

The paper integrates multi-omic data from gliomas to show that epigenetic instability and transcriptional disruption are linked to tumor aggressiveness and environmental stress response.

bioRxiv · Jul 22, 2020Cancer Biology