Author

A. Minoda

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Immunology· 2 Biochemistry· 1 Cell Biology· 1 Evolutionary Biology· 1

Signature Assays, Organisms & Methods

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Research Focus:cell type annotation· 3 Approach:deep learning· 2 Research Focus:differential expression· 2 Approach:experimental assay· 2 Organism:human· 2 Assay:scRNA-seq· 2 Approach:statistical model· 2 Assay:ATAC-seq· 1

Frequent Co-Authors

H. Suzuki· 2 shared H. Yabukami· 2 shared K. Hashimoto· 2 shared A. Inoue· 1 shared A. Miyawaki· 1 shared A. Sakaue-Sawano· 1 shared C. Chaparro· 1 shared C. Cosseau· 1 shared

Activity by Year

2017-2021 · peak 3/yr

Co-Author Collaboration Network

10 top collaborators · 15 mutual co-author links

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2 shared papersImmunology

H. Suzuki

Mutual co-authors in cluster

Author profile →

5 papers

Recent·Most cited

Integrative analysis of scRNAs-seq and scATAC-seq revealed transit-amplifying thymic epithelial cells expressing autoimmune regulator

T. Akiyama, T. MIyao, M. Miyauchi, T. Kelly, T. W. Terooatea, T. Ishikawa, E. Oh, S. Hirai, K. Horie, Y. Takakura, H. Ohki, M. Hayama, Y. Maruyama, T. Seki, H. Yabukami, , N. Akiyama

The paper identifies transit-amplifying thymic epithelial cells expressing Aire and CD80 through integrative scRNA-seq and scATAC-seq analysis.

bioRxiv · Oct 4, 2021Immunology

Chromatin structure changes in Daphnia populations upon exposure to environmental cues - or - The discovery of Wolterecks \"Matrix\"

R. de Carvalho Augusto, A. Minoda, O. Rey, C. Cosseau, C. Chaparro, J. Vidal-Dupiol, J.-F. Allienne, D. Duval, S. Pinaud, S. Tonges, R. Andriantsoa, E. Luquet, F. Aubret, M. D. Sow, P. David, , C. Grunau

The paper revisits Woltereck's Matrix hypothesis by showing chromatin structure changes in Daphnia exposed to environmental cues using a new ATAC-seq method.

bioRxiv · Oct 30, 2019 · PreprintEvolutionary Biology

Single-cell transcriptomics reveals expansion of cytotoxic CD4 T-cells in supercentenarians

K. Hashimoto, T. Kouno, T. Ikawa, N. Hayatsu, Y. Miyajima, H. Yabukami, T. Terooatea, T. Sasaki, T. Suzuki, M. Valentine, G. Pascarella, Y. Okazaki, H. Suzuki, J. W. Shin, A. Minoda, , P. Carninci

This study identifies an increase in cytotoxic CD4 T-cells and a reduction in B-cells in supercentenarians through single-cell transcriptomics.

bioRxiv · May 20, 2019Immunology

OVOL2 induces mesenchymal-to-epithelial transition in fibroblasts and enhances reprogramming to epithelial lineages

K. Watanabe, Y. Liu, S. Noguchi, M. Murray, J.-C. Chang, M. Kishima, H. Nishimura, K. Hashimoto, A. Minoda, H. Suzuki

This study identifies OVOL2 as a key factor that induces mesenchymal-to-epithelial transition in fibroblasts and enhances reprogramming to epithelial lineages.

bioRxiv · Mar 14, 2019Cell Biology

Structure of the triose-phosphate/phosphate translocator reveals the basis of substrate specificity

Y. Lee, T. Nishizawa, M. Takemoto, K. Kumazaki, K. Yamashita, K. Hirata, A. Minoda, S. Nagatoishi, K. Tsumoto, R. Ishitani, O. Nureki

This study determines the crystal structures of TPT bound to substrates, revealing the molecular basis of its strict 1:1 exchange mechanism.

bioRxiv · Aug 18, 2017Biochemistry