Author

A. V. Melnik

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Microbiology· 5

Signature Assays, Organisms & Methods

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Organism:human· 4 Assay:metagenomics· 4 Research Focus:cell type annotation· 3 Approach:statistical model· 3 Research Focus:differential expression· 2 Approach:experimental assay· 2 Assay:metabolomics· 2 Research Focus:clustering· 1

Frequent Co-Authors

P. C. Dorrestein· 5 shared A. A. Aksenov· 3 shared G. Humphrey· 3 shared E. R. Hyde· 2 shared G. Ackermann· 2 shared M. Wang· 2 shared N. Garg· 2 shared R. A. Quinn· 2 shared

Activity by Year

2018-2019 · peak 3/yr

Co-Author Collaboration Network

10 top collaborators · 45 mutual co-author links

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5 shared papersMicrobiology

P. C. Dorrestein

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Author profile →

5 papers

Recent·Most cited

The Molecular and Microbial Microenvironments in Chronically Diseased Lungs

N. Garg, A. V. Melnik, Y. Vasquez-Baeza, A. Aksenov, E. R. Hyde, A. C. McAvoy, M. Wang, R. da Silva, I. Protsyuk, J. V. Wu, A. Bouslimani, Y. W. Lim, T. Luzzatto-Knaan, W. Comstock, R. A. Quinn, , R. Knight

The paper generates 3D maps of microbiomes and metabolomes in cystic fibrosis lungs, revealing personalized and regiospecific chemical environments and microbial interactions.

bioRxiv · Jun 19, 2019 · PreprintMicrobiology

Chemical Impacts of the Microbiome Across Scales Reveal Novel Conjugated Bile Acids

R. A. Quinn, A. Vrbanac, A. V. Melnik, K. A. Patras, M. Christy, A. T. Nelson, A. A. Aksenov, A. Tripathi, G. Humphrey, R. da Silva, R. Bussell, T. Thron, M. Wang, F. Vargas, J. Gauglitz, , P. C. Dorrestein

The paper identifies novel conjugated bile acids produced by the microbiome in mice and humans using mass spectrometry and a murine 3D model.

bioRxiv · Jun 3, 2019 · PreprintMicrobiology

Cutibacterium acnes antibiotic production shapes niche competition in the human skin microbiome

J. Claesen, J. B. Spagnolo, S. Flores Ramos, K. L. Kurita, A. L. Byrd, A. A. Aksenov, A. V. Melnik, W. R. Wong, S. Wang, R. D. Hernandez, M. S. Donia, P. C. Dorrestein, H. H. Kong, J. A. Segre, R. G. Linington, , K. P. Lemon

The paper identifies cutimycin, an antibiotic produced by Cutibacterium acnes, which reduces Staphylococcus colonization in human skin follicles.

bioRxiv · Mar 30, 2019Microbiology

Identification of the bacterial biosynthetic gene clusters of the oral microbiome illuminates the unexplored social language of bacteria during health and disease

G. Aleti, J. L. Baker, X. Tang, R. Alvarez, M. Dinis, N. C. Tran, A. V. Melnik, C. Zhong, M. Ernst, P. C. Dorrestein, A. Edlund

This study identifies 4,915 bacterial biosynthetic gene clusters in the oral microbiome and finds differential representation of BGCs in health versus disease states like dental caries and periodontitis.

bioRxiv · Oct 3, 2018Microbiology

American Gut: an Open Platform for Citizen-Science Microbiome Research

D. McDonald, E. R. Hyde, J. W. Debelius, J. T. Morton, A. Gonzalez, G. Ackermann, A. A. Aksenov, B. Behsaz, C. Brennan, Y. Chen, L. DeRight Goldasicha, P. C. Dorrestein, R. R. Dunn, A. K. Fahimipourg, J. Gaffney, , Rah

The paper uses citizen-science data to analyze human stool microbiomes, revealing new insights into microbial diversity, metabolome composition, and associations with diet and health.

bioRxiv · Mar 7, 2018Microbiology