Author

S.-H. Yang

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Microbiology· 4 Ecology· 2 Cancer Biology· 1

Signature Assays, Organisms & Methods

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Approach:experimental assay· 5 Research Focus:cell type annotation· 3 Assay:metagenomics· 3 Organism:non-human primate· 3 Research Focus:gene regulatory network inference· 2 Assay:whole-genome sequencing· 2 Organism:bacteria (other)· 1 Assay:bulk RNA-seq· 1

Frequent Co-Authors

S.-L. Tang· 4 shared C.-Y. Lu· 3 shared K. Tandon· 3 shared A. Sharrocks· 1 shared B. Baatar· 1 shared C. S. Ng· 1 shared C.-C. Yang· 1 shared C.-G. Liu· 1 shared

Activity by Year

2019-2023 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 16 mutual co-author links

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4 shared papersMicrobiology

S.-L. Tang

Mutual co-authors in cluster

Author profile →

7 papers

Recent·Most cited

Successive responses of three coral holobiont components (coral hosts, symbiotic algae, and bacteria) to daily temperature fluctuations

Y. E. Hsieh, C.-Y. Lu, P.-Y. Liu, J.-M. Kao, S.-Y. Yang, C.-Y. Wu, J.-W. M. Wong, S. Shikina, T.-Y. Fan, S.-H. Yang

This study examines how coral hosts, symbiotic algae, and bacteria respond to daily temperature fluctuations and continuous warming, finding that diurnal fluctuations may reduce heat stress and bacterial response changes.

bioRxiv · Sep 30, 2023Microbiology

eRNA profiling uncovers the enhancer landscape of oesophageal adenocarcinoma and reveals new deregulated pathways

I. Ahmed, S.-H. Yang, S. Ogden, Y. Li, W. Zhang, the OCCAMs consortium, A. Sharrocks

The paper identifies enhancer RNAs in oesophageal adenocarcinoma using RNA-seq and open chromatin maps, revealing new deregulated pathways and their clinical relevance.

bioRxiv · May 11, 2022Cancer Biology

The soil microbiome may offer solutions to ginger cultivation

C.-W. Wang, J.-W. Michelle Wong, S.-S. Yeh, Y. Eric Hsieh, C.-H. Tseng, S.-H. Yang, S.-L. Tang

This study investigates the soil microbiome of ginger cultivation in Taitung, Taiwan, to identify microbial differences between diseased and healthy soils and assess the impact of biocontrol agents and fungicides on microbial communities and ginger productivity.

bioRxiv · May 3, 2022 · PreprintMicrobiology

Exploration of molecular mechanism underlying the self-flocculation of Zymomonas mobilis through comparative omics analyses and experimental validations for developing robust production systems

L.-Y. Cao, Y. Yang, C.-G. Liu, Y. Chen, X. Zhang, X. Wang, J. Xia, S.-H. Yang, F.-W. Bai

This study identifies genetic mutations in Zymomonas mobilis that cause self-flocculation by disrupting gene function and increasing c-di-GMP levels, enabling improved biomass recovery and productivity.

bioRxiv · Jun 18, 2021 · PreprintMicrobiology

A genomic view of coral-associated Prosthecochloris and a companion sulfate-reducing bacterium

Y.-H. Chen, S.-H. Yang, K. Tandon, C.-Y. Lu, H.-J. Chen, C.-J. Shih, S.-L. Tang

This study identifies and characterizes novel genomes of coral-associated Prosthecochloris and a sulfate-reducing bacterium, revealing their genomic and metabolic traits and a potential syntrophic relationship in coral endolithic communities.

Microbial Genomics · May 5, 2021Peer-reviewedMicrobiology

Aquatic microbial community is partially functionally redundant: insights from an in situ reciprocal transplant experiment

K. Tandon, M.-T. Wan, C.-C. Yang, S.-H. Yang, B. Baatar, C.-Y. Chiu, J.-W. Tsai, W.-C. Liu, C. S. Ng, S.-L. Tang

This study uses an in situ reciprocal transplant experiment to show that microbial communities in freshwater lakes show partial functional redundancy, with functions aligning to the incubating lake's profile.

bioRxiv · Feb 1, 2020Ecology

Comparative genomics: Dominant coral bacterium Endozoicomonas acroporae metabolizes Dimethylsulfoniopropionate (DMSP)

K. Tandon, P.-W. Chiang, C.-Y. Lu, N. Wada, S.-H. Yang, Y.-F. Chan, P.-Y. Chen, H.-Y. Chang, M.-S. Chou, W.-M. Chen, S.-L. Tang

This study identifies and functionally characterizes DMSP metabolism in Endozoicomonas acroporae, confirming its role in the coral sulfur cycle.

bioRxiv · Aug 5, 2019Ecology