Author

T. Aoki

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Cancer Biology· 2 Biophysics· 1 Ecology· 1 Pathology· 1

Signature Assays, Organisms & Methods

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Approach:experimental assay· 3 Research Focus:cell type annotation· 2 Research Focus:cell-cell communication· 2 Organism:human· 2 Assay:spatial transcriptomics· 2 Organism:bacteria (other)· 1 Approach:deep learning· 1 Research Focus:differential expression· 1

Frequent Co-Authors

A. Gamboa· 2 shared A. Jiang· 2 shared A. Merchant· 2 shared A. R. Colombo· 2 shared C. Steidl· 2 shared K. Takata· 2 shared M. Hav· 2 shared Y. Yin· 2 shared

Activity by Year

2019-2024 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 28 mutual co-author links

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2 shared papersCancer Biology

A. Gamboa

Mutual co-authors in cluster

Author profile →

5 papers

Recent·Most cited

Enhanced intracranial aneurysm development in a rat model of polycystic kidney disease.

A. F. Cayron, S. Morel, M. Azam, J. Haemmerli, T. Aoki, P. Bijlenga, E. Allemann, B. R. Kwak

This study shows that PCK rats, a model of polycystic kidney disease, develop intracranial aneurysms more rapidly and have increased aortic dissection risk due to anatomical and vascular changes.

bioRxiv · Feb 28, 2024Pathology

Single cell spatial analysis and biomarker discovery in Hodgkin lymphoma

A. M. Xu, A. Jiang, T. Aoki, A. Gamboa, L. Chong, A. R. Colombo, Y. Yin, J. Lownik, K. Takata, M. Hav, C. Steidl, A. Merchant

This study uses spatial imaging to analyze Hodgkin lymphoma tumor microenvironments and identifies new biomarkers related to immune cell interactions and checkpoints.

bioRxiv · May 24, 2023 · PreprintCancer Biology

The spatially resolved tumor microenvironment predicts treatment outcome in relapsed/refractory Hodgkin lymphoma

T. Aoki, A. Jiang, A. Xu, Y. Yin, A. Gamboa, K. Milne, K. Takata, T. Miyata-Takata, S. Wu, M. Warren, C. Strong, T. Goodyear, K. Morris, L. C. Chong, M. Hav, , C. Steidl

The paper develops a prognostic model using spatially resolved tumor microenvironment features to predict treatment outcomes in relapsed/refractory Hodgkin lymphoma.

bioRxiv · May 19, 2023Cancer Biology

The Metabolites NADP+ and NADPH are the Targets of the Circadian Protein Nocturnin (Curled)

M. A. Estrella, J. Du, L. Chen, S. Rath, E. Prangley, A. Chitrakar, T. Aoki, P. Schedl, J. Rabinowitz, A. Korennykh

This study identifies NADP+ and NADPH as substrates of the circadian protein Nocturnin, showing its enzymatic activity in converting these metabolites and revealing structural insights into its mechanism.

bioRxiv · Jan 30, 2019Biophysics

Bacterial community changes with cryoconite granule size and their susceptibility to exogenous nutrients on 10 glaciers in northwestern Greenland

J. Uetake, N. Nagatsuka, Y. Onuma, N. Takeuchi, H. Motoyama, T. Aoki

The paper examines bacterial community changes across different cryoconite granule sizes and their response to exogenous nutrients on 10 glaciers in northwestern Greenland.

bioRxiv · Jan 8, 2019Ecology