Author

T. Greb

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

Click to filter author papers

Plant Biology· 10

Signature Assays, Organisms & Methods

Click to filter · or open tag

Approach:experimental assay· 8 Organism:Arabidopsis· 6 Research Focus:development & morphogenesis· 6 Research Focus:cell type annotation· 5 Organism:plant (other)· 4 Assay:bulk RNA-seq· 2 Research Focus:chromatin & epigenetic regulation· 2 Research Focus:gene regulatory network inference· 2

Frequent Co-Authors

D. Shi· 5 shared V. Jouannet· 4 shared C. Song· 2 shared C. Wenzl· 2 shared E.-S. Wallner· 2 shared J. U. Lohmann· 2 shared J. Zhao· 2 shared K. Brackmann· 2 shared

Activity by Year

2017-2023 · peak 3/yr

Co-Author Collaboration Network

10 top collaborators · 26 mutual co-author links

Click any collaborator node to inspect or filter shared papers

Focal author (center)Selected co-authorORCID co-authorUnlinked name

Curved chords = mutual co-authorship

5 shared papersPlant Biology

D. Shi

Mutual co-authors in cluster

Author profile →

10 papers

Recent·Most cited

Strigolactones optimise plant water usage by modulating vessel formation

J. Zhao, D. Shi, K. Kaeufer, C. Song, X. Xu, L. Luzzietti, T. Bennett, K. Kaufmann, T. Greb

The paper identifies strigolactone signaling's role in modulating vessel element formation in Arabidopsis, enhancing drought resistance by altering water transport efficiency.

bioRxiv · Apr 5, 2023Plant Biology

Strigo-D2 - a bio-sensor for monitoring the spatio-temporal pattern of strigolactone signaling in intact plants

C. Song, J. Zhao, M. Guichard, D. Shi, G. Grossmann, C. Schmitt, V. Jouannet, T. Greb

The paper introduces Strigo-D2, a genetically encoded sensor to monitor strigolactone signaling in plants, showing differential dynamics across cell types.

bioRxiv · Aug 3, 2021Plant Biology

A 3D gene expression atlas of the floral meristem based on spatial reconstruction of single nucleus RNA sequencing data

M. Neumann, X. Xu, C. Smaczniak, J. Schumacher, W. Yan, T. Greb, N. Bluthgen, H. Jonsson, J. Traas, K. Kaufmann, J. M. Muino

The paper reconstructs 3D gene expression patterns in a floral meristem using single-nuclei RNA-seq and spatial reconstruction to study cell identity and organ patterning.

bioRxiv · Jun 30, 2021Plant Biology

A novel pathway controlling cambium initiation and -activity via cytokinin biosynthesis in Arabidopsis

A. Rahimi, O. Karami, A. Dwituti Lestari, D. Shi, T. Greb, R. Offringa

This study identifies AHL15 as a key regulator of vascular cambium activity and secondary xylem formation in Arabidopsis through cytokinin biosynthesis.

bioRxiv · Jun 19, 2020Plant Biology

Tissue-specific transcriptome profiling of the Arabidopsis thaliana inflorescence stem reveals local cellular signatures.

D. Shi, V. Jouannet, J. Agusti, V. Kaul, V. Levitsky, P. Sanchez, V. V. Mironova, T. Greb

The paper establishes a genome-wide high-resolution gene expression map of the Arabidopsis thaliana inflorescence stem, identifying tissue-specific cellular signatures and transcriptional regulators.

bioRxiv · Feb 10, 2020Plant Biology

Computational modelling of cambium activity provides a regulatory framework for simulating radial plant growth

I. Lebovka, B. Hay Mele, X. Liu, A. Zakieva, T. Schlamp, N. Gursanscky, R. M. H. Merks, R. Grosseholz, T. Greb

The paper develops a computational model of cambium activity to simulate radial plant growth by integrating regulatory factors and physical constraints.

bioRxiv · Jan 16, 2020Plant Biology

OBERON3 and SUPPRESSOR OF MAX2 1-LIKE proteins form a regulatory module specifying phloem identity

E.-S. Wallner, N. Tonn, D. Shi, L. Luzzietti, F. Wanke, P. Hunziker, Y. Xu, I. Jung, V. Lopez-Salmeron, M. Gebert, C. Wenzl, J. U. Lohmann, K. Harter, T. Greb

The paper identifies OBERON3 and SUPPRESSOR OF MAX2 1-LIKE proteins as a regulatory module that establishes phloem identity in Arabidopsis thaliana through chromatin remodeling and gene expression.

bioRxiv · Dec 21, 2019 · PreprintPlant Biology

SUPPRESSOR OF MAX2 1-LIKE 5 promotes secondary phloem formation during radial stem growth

E.-S. Wallner, V. Jouannet, T. Greb

The paper shows that SMXL5 is essential for secondary phloem formation in Arabidopsis, with SMXL4 playing a secondary role in this process.

bioRxiv · Apr 5, 2019Plant Biology

WUSCHEL acts as a rheostat on the auxin pathway to maintain apical stem cells in Arabidopsis

Y. Ma, A. Miotk, Z. Sutikovic, A. Medzihradszky, C. Wenzl, O. Ermakova, C. Gaillochet, J. Forner, G. Utan, K. Brackmann, C. S. Galvan-Ampudia, T. Vernoux, T. Greb, J. U. Lohmann

This study shows WUSCHEL regulates auxin signaling to maintain apical stem cells in Arabidopsis by controlling histone acetylation and balancing differentiation.

bioRxiv · Jan 10, 2019Plant Biology

Spatial Specificity Of Auxin Responses Coordinates Wood Formation

K. Brackmann, V. Jouannet, J. Qi, T. Schlamp, K. Gruenwald, P. Sanchez, T. Greb

The paper shows auxin signaling regulates cambium activity through specific transcription factors, influencing stem cell number and wood formation.

bioRxiv · May 27, 2017Plant Biology