Author

A. Forrest

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Bioengineering· 1 Cancer Biology· 1 Evolutionary Biology· 1 Immunology· 1

Signature Assays, Organisms & Methods

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Approach:statistical model· 3 Research Focus:cell type annotation· 2 Research Focus:differential expression· 2 Approach:experimental assay· 2 Organism:human· 2 Organism:Arabidopsis· 1 Assay:bulk RNA-seq· 1 Research Focus:cell-cell communication· 1

Frequent Co-Authors

A. A. C. Hooft van Huysduynen· 1 shared A. Franzke· 1 shared A. Guggisberg· 1 shared A. Harkess· 1 shared A. Parker· 1 shared A. R. Zuntini· 1 shared A. S. Cazet· 1 shared A. Swarbrick· 1 shared

Activity by Year

2019-2023 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 18 mutual co-author links

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1 shared paperEvolutionary Biology

A. A. C. Hooft van Huysduynen

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4 papers

Recent·Most cited

Neuronal functional connectivity is impaired in a layer dependent manner near the chronically implanted microelectrodes

K. Chen, A. Forrest, G. Gonzalez-Burgos, T. D. Y. Kozai

This study examines how chronic microelectrode implantation affects functional connectivity in different cortical layers and the hippocampus over 16 weeks, finding layer-specific impairments and altered interlaminar communication.

bioRxiv · Nov 6, 2023 · PreprintBioengineering

Global Phylogeny of the Brassicaceae Provides Important Insights into Gene Discordance

K. P. Hendriks, C. Kiefer, I. A. Al-Shehbaz, C. D. Bailey, A. A. C. Hooft van Huysduynen, L. Nikolov, L. Nauheimer, A. R. Zuntini, D. A. German, A. Franzke, M. A. Koch, M. A. Lysak, O. Toro-Nunez, B. Ozudogru, V. R. Invernon, , Fore

This paper presents a comprehensive Brassicaceae phylogeny, identifies cytonuclear discordance due to hybridization, and proposes new tribes, providing a tool for biodiversity and plant biology studies.

bioRxiv · Sep 1, 2022Evolutionary Biology

Single-cell analysis reveals diverse stromal subsets associated with immune evasion in triple-negative breast cancer

S. Z. Wu, D. L. Roden, C. Wang, H. Holliday, K. Harvey, A. S. Cazet, K. J. Murphy, B. Pereira, G. Al-Eryani, N. Bartonicek, R. Hou, J. R. Torpy, S. Junankar, C.-L. Chan, E. Lam, , A. Swarbrick

This study identifies diverse stromal subsets in TNBC using single-cell RNA-seq and links them to immune evasion mechanisms and therapeutic targets.

bioRxiv · Jun 4, 2020Cancer Biology

Comprehensive characterisation of molecular host-pathogen interactions in influenza A virus-infected human macrophages

S. Clohisey, N. Parkinson, B. Wang, N. Bertin, H. Wise, A. Tomoiu, K. Summers, P. Carninci, A. Forrest, Y. Hayashizaki, P. Digard, D. Hume, J. K. Baillie, FANTOM 5 Consortium

This study characterizes molecular host-pathogen interactions in influenza A virus-infected human macrophages using CAGE sequencing, revealing snatching preferences and avoidance patterns of host RNAs.

bioRxiv · Jun 17, 2019 · PreprintImmunology