Author

N. Bartonicek

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Cancer Biology· 4 Immunology· 1

Signature Assays, Organisms & Methods

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Research Focus:cell type annotation· 5 Research Focus:differential expression· 5 Approach:experimental assay· 5 Organism:human· 5 Research Focus:gene regulatory network inference· 4 Assay:scRNA-seq· 3 Approach:statistical model· 3 Research Focus:cell-cell communication· 2

Frequent Co-Authors

A. Swarbrick· 5 shared C.-L. Chan· 5 shared G. Al-Eryani· 5 shared D. L. Roden· 4 shared K. Harvey· 4 shared S. Junankar· 4 shared S. Z. Wu· 4 shared E. Lim· 3 shared

Activity by Year

2020-2023 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 45 mutual co-author links

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5 shared papersCancer Biology

A. Swarbrick

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Author profile →

5 papers

Recent·Most cited

An experimental comparison of the Digital Spatial Profiling and Visium spatial transcriptomics technologies for cancer research

T. Wang, K. Harvey, J. Reeves, D. L. Roden, N. Bartonicek, J. Yang, G. Al-Eryani, D. Kaczorowski, C.-L. Chan, J. Powell, S. O'Toole, E. Lim, A. Swarbrick

This study compares Digital Spatial Profiling and Visium spatial transcriptomics technologies for cancer research, finding differences in sensitivity, specificity, and application suitability.

bioRxiv · Apr 6, 2023 · PreprintCancer Biology

Integration of single-cell RNA and protein data identifies novel clinically-relevant lymphocyte phenotypes in breast cancers

G. Al-Eryani, N. Bartonicek, C.-L. Chan, A. Anderson, K. Harvey, S. Z. Wu, D. Roden, T. Wang, J. Reeves, B. Z. Yeung, E. Masle-Farquhar, C. C. Goodnow, C. Ma, T. G. Phan, J. Lundeberg, , A. Swarbrick

The paper integrates single-cell RNA and protein data from breast cancer samples to identify novel lymphocyte phenotypes and their clinical relevance.

bioRxiv · May 31, 2022 · PreprintImmunology

DNA barcoding reveals ongoing immunoediting of clonal cancer populations during metastatic progression and in response to immunotherapy

L. A. Baldwin, N. Bartonicek, J. Yang, S. Z. Wu, N. Deng, D. L. Roden, C.-L. Chan, G. Al-Eryani, D. J. Zanker, B. S. Parker, A. Swarbrick, S. Junankar

This study uses DNA barcoding to track clonal evolution in breast cancer during metastasis and immunotherapy, finding ongoing immunoediting and identifying potential therapeutic targets.

bioRxiv · Jan 11, 2021Cancer Biology

Single-cell analysis reveals diverse stromal subsets associated with immune evasion in triple-negative breast cancer

S. Z. Wu, D. L. Roden, C. Wang, H. Holliday, K. Harvey, A. S. Cazet, K. J. Murphy, B. Pereira, G. Al-Eryani, N. Bartonicek, R. Hou, J. R. Torpy, S. Junankar, C.-L. Chan, E. Lam, , A. Swarbrick

This study identifies diverse stromal subsets in TNBC using single-cell RNA-seq and links them to immune evasion mechanisms and therapeutic targets.

bioRxiv · Jun 4, 2020Cancer Biology

Cryopreservation of human cancers conserves tumour heterogeneity for single-cell multi-omics analysis

S. Z. Wu, D. L. Roden, G. Al-Eryani, N. Bartonicek, K. Harvey, A. S. Cazet, C.-L. Chan, S. Junankar, M. N. Hui, E. Millar, J. Beretov, L. Horvath, A. M. Joshua, P. Stricker, J. S. Wilmott, , A. Swarbrick

This study shows that cryopreservation of human cancers preserves tumour heterogeneity for single-cell multi-omics analysis, with comparable results to fresh tissue.

bioRxiv · Jun 4, 2020Cancer Biology