Author

E. Winter

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Cell Biology· 2 Microbiology· 2 Cancer Biology· 1 Immunology· 1

Signature Assays, Organisms & Methods

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Organism:human· 5 Research Focus:cell type annotation· 4 Research Focus:differential expression· 4 Approach:statistical model· 4 Approach:experimental assay· 2 Assay:metagenomics· 2 Assay:proteomics· 2 Assay:scRNA-seq· 2

Frequent Co-Authors

C. Thoeni· 2 shared G. D. Bader· 2 shared I. D. McGilvray· 2 shared J. Manuel· 2 shared S. A. MacParland· 2 shared S. Chung· 2 shared T. S. Andrews· 2 shared A. Duex· 1 shared

Activity by Year

2021-2023 · peak 3/yr

Co-Author Collaboration Network

10 top collaborators · 28 mutual co-author links

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Curved chords = mutual co-authorship

2 shared papersCell Biology

C. Thoeni

Mutual co-authors in cluster

Author profile →

6 papers

Recent·Most cited

Contrasting Effects of SARS-CoV-2 Vaccination vs. Infection on Antibody and TCR Repertoires

J. Braun, E. D. Hill, E. Contreras, M. Yasuda, A. Morgan, S. Ditelberg, E. Winter, C. Callahan, G. Mazzoni, A. Kirmaier, H. Mirebrahim, H. Asgharian, D. Telman, A.-R. Y. Collier, D. H. Barouch, , R. Arnaout

This study compares antibody and TCR repertoires in SARS-CoV-2 infectees, vaccinees, and controls to predict neutralizing antibody titers and identifies subtle differences in adaptive immune responses.

bioRxiv · Sep 8, 2023 · PreprintImmunology

Effect of a topically applied gel containing antibodies from bovine milk on the relative abundance of Staphylococci in the canine skin microbiome

E. S. Klaassens, S. Auxilia, M. L. Baak, R. Bongoni, C. M. M. van Damme, S. Bijker, N. Dietz, E. Winter, F. Broere, B. Foerster

A pilot study shows that a bovine milk antibody gel reduces Staphylococcus pseudintermedius on canine skin and increases microbiome diversity, though results are not statistically significant.

bioRxiv · Jul 29, 2023 · PreprintMicrobiology

Single-cell and spatial transcriptomics reveals the human liver immunological landscape and myeloid dysfunction in PSC.

T. S. Andrews, D. Nakib, C. Perciani, X. Z. Ma, L. Liu, E. Winter, D. Camat, S. Chung, J. Manuel, S. Mangroo, B. Hansen, B. Arpinder, C. Thoeni, B. Sayed, J. Feld, , S. A. MacParland

This paper uses single-cell and spatial transcriptomics to map the immune landscape of PSC livers, revealing myeloid dysfunction and cytokine-driven inflammation.

bioRxiv · Jul 28, 2023 · PreprintCell Biology

DNAJB1-PRKACA in HEK293T cells induces LINC00473 overexpression that depends on PKA signaling

S. S. Kim, I. Kycia, M. Karski, R. K. Ma, E. A. Bordt, J. Kwan, A. Karki, E. Winter, R. G. Aktas, Y. Wu, A. Emili, D. E. Bauer, P. Sethupathy, K. Vakili

The paper engineers a DNAJB1-PRKACA fusion in HEK293T cells to study its oncogenic effects, finding LINC00473 overexpression dependent on PKA signaling.

bioRxiv · Aug 11, 2021Cancer Biology

Archival influenza virus genomes from Europe reveal genomic and phenotypic variability during the 1918 pandemic

L. V. Patrono, B. Vrancken, M. Budt, A. Duex, S. Lequime, S. Boral, M. T. P. Gilbert, J. F. Gogarten, L. Hoffmann, D. Horst, K. Merkel, D. Morens, B. Prepoint, J. Schlotterbeck, V. Schuenemann, , S. Calvignac-Spencer

bioRxiv · May 14, 2021Microbiology

Single Cell, Single Nucleus and Spatial RNA Sequencing of the Human Liver Identifies Hepatic Stellate Cell and Cholangiocyte Heterogeneity

T. S. Andrews, J. Atif, J. C. Liu, C. T. Perciani, X.-Z. Ma, C. Thoeni, M. Slyper, G. Eraslan, A. Segerstolpe, J. Manuel, S. Chung, E. Winter, I. Cirlan, N. Khuu, S. Fischer, , S. A. MacParland

This study uses scRNA-seq and snRNA-seq to analyze 73,295 human liver cells, revealing heterogeneity in hepatic stellate cells, cholangiocytes, and interzonal hepatocytes.

bioRxiv · Mar 27, 2021Cell Biology