Author

J. Webber

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Plant Biology· 2 Cancer Biology· 1 Evolutionary Biology· 1 Immunology· 1

Signature Assays, Organisms & Methods

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Approach:statistical model· 3 Assay:whole-genome sequencing· 3 Organism:human· 2 Organism:plant (other)· 2 Research Focus:cell type annotation· 1 Research Focus:cell-cell communication· 1 Research Focus:chromatin & epigenetic regulation· 1 Approach:comparative / phylogenetic analysis· 1

Frequent Co-Authors

J. Grimwood· 3 shared J. Schmutz· 3 shared L. Boston· 2 shared A. A. Bobrov· 1 shared A. Braeutigam· 1 shared A. Frampton· 1 shared A. Jainarayanan· 1 shared A. Lorenz· 1 shared

Activity by Year

2023-2024 · peak 3/yr

Co-Author Collaboration Network

10 top collaborators · 17 mutual co-author links

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3 shared papersPlant Biology

J. Grimwood

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Author profile →

5 papers

Recent·Most cited

Asbestos Mineral Fibre Exposure Significantly Affects Volatile Organic Compound Profiles of Mesothelial Cell Lines In Vitro

S. Bonsall, T. Issitt, N. Peake, M. Herigstad, J. Webber, S. Haywood-Small

This study shows asbestos mineral fiber exposure changes VOC profiles in mesothelioma cell lines, suggesting potential biomarkers for asbestos exposure.

bioRxiv · Jul 8, 2024Cancer Biology

Assembly, comparative analysis, and utilization of a single haplotype reference genome for soybean

M. J. C. Espina, J. T. Lovell, J. W. Jenkins, S. Shu, A. Sreedasyam, B. D. Jordan, j. Webber, L. Boston, T. Bruna, J. Talag, D. M. Goodstein, J. Grimwood, G. Stacey, S. B. Cannon, A. Lorenz, , R. M. Stupar

This paper presents an updated soybean genome assembly (Wm82.a6) and compares it with other assemblies and Fiskeby III, revealing genomic heterogeneity and polymorphisms.

bioRxiv · Apr 26, 2024Plant Biology

The Marchantia pangenome reveals ancient mechanisms of plant adaptation to the environment

C. Beaulieu, C. Libourel, D.-L. Mbadinga Zamar, K. El Mahboubi, D. J. Hoey, J. Keller, C. Girou, H. San Clemente, I. Diop, E. Amblard, A. Theron, S. Cauet, N. Rodde, Z. Sabine, W. Halpape, , P.-M. Delaux

This study analyzes the pangenome of Marchantia polymorpha to identify genetic features involved in plant adaptation to terrestrial environments, finding shared and lineage-specific genes with flowering plants.

bioRxiv · Oct 27, 2023 · PreprintPlant Biology

Single-cell immune multi-omics and repertoire analyses in pancreatic ductal adenocarcinoma reveal differential immunosuppressive mechanisms within different tumour microenvironments

S. Sivakumar, A. Jainarayanan, E. Arbe-Barnes, M. N. Leathlobhair, P. K. Sharma, S. Amin, L. Heij, S. Hegde, A. Magen, F. Tucci, B. Sun, S. Wu, N. M. Anand, H. Slawinski, S. Revale, , R. J. M. Bashford-Rogers

The paper analyzes single-cell immune multi-omics data from PDAC to identify differential immunosuppressive mechanisms in distinct tumour microenvironments.

bioRxiv · Aug 31, 2023 · PreprintImmunology

Seagrass genomes reveal a hexaploid ancestry facilitating adaptation to the marine environment

X. Ma, S. Vanneste, J. Chang, L. Ambrosino, K. Barry, T. Bayer, A. A. Bobrov, L. Boston, J. E. Campbell, H. Chen, M. L. Chiusano, E. Dattolo, J. Grimwood, G. He, J. Jenkins, , Y. Van de Peer

This study presents chromosome-level genome assemblies of seagrass species and identifies ancient and recent genome duplication events linked to adaptation to marine environments.

bioRxiv · Mar 5, 2023 · PreprintEvolutionary Biology