Author

K. Jeffery

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Microbiology· 4 Animal Behavior & Cognition· 1

Signature Assays, Organisms & Methods

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Organism:human· 5 Approach:experimental assay· 3 Research Focus:differential expression· 2 Assay:metagenomics· 2 Research Focus:benchmarking· 1 Research Focus:cell type annotation· 1 Assay:clinical cohort / trial· 1 Research Focus:clustering· 1

Frequent Co-Authors

P. C. Matthews· 4 shared A. Ansari· 2 shared A. S. Walker· 2 shared A. Vaughan· 2 shared D. Foster· 2 shared D. W. Crook· 2 shared K. Lewandowski· 2 shared M. W. Carroll· 2 shared

Activity by Year

2017-2019 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 37 mutual co-author links

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4 shared papersMicrobiology

P. C. Matthews

Mutual co-authors in cluster

Author profile →

5 papers

Recent·Most cited

Metagenomic Nanopore sequencing of influenza virus direct from clinical respiratory samples

K. Lewandowski, Y. Xu, S. T. Pullan, D. Foster, N. D. Sanderson, A. Vaughan, M. Morgan, N. Bright, J. Kavanagh, R. T. Vipond, M. W. Carroll, A. C. Marriott, K. E. Gooch, M. Andersson, K. Jeffery, , P. C. Matthews

This study uses metagenomic Nanopore sequencing to detect influenza virus in clinical respiratory samples, achieving high sensitivity and complete genome sequencing.

bioRxiv · Jun 19, 2019Microbiology

Data from an electronic health informatics pipeline to describe clearance dynamics of Hepatitis B surface antigen (HBsAg) and e-Antigen (HBeAg) in chronic HBV infection

L. O. Downs, D. Smith, S. F. Lumley, M. Patel, A. L. McNaughton, J. Mokaya, A. Ansari, H. Salih, K. A. Varnai, O. Freeman, S. Cripps, J. Phillips, J. Collier, K. Woods, K. Channon, , P. C. Matthews

The paper describes an electronic health informatics pipeline that collects longitudinal clinical data on HBsAg and HBeAg clearance in chronic HBV infection, revealing demographic and treatment-related factors associated with clearance.

bioRxiv · Mar 26, 2019Microbiology

Nanopore metagenomic sequencing of full length human metapneumovirus (HMPV) within a unique sub-lineage

Y. Xu, K. Lewandowski, S. Lumley, N. D. Sanderson, A. Vaughan, R. T. Vipond, M. W. Carroll, K. Jeffery, D. Foster, A. S. Walker, T. E. A. Peto, D. W. Crook, S. T. Pullan, P. C. Matthews

This study uses Nanopore metagenomic sequencing to directly sequence the full-length HMPV genome from a UK patient, identifying a unique genetic group and demonstrating the utility of Nanopore for clinical diagnosis.

bioRxiv · Dec 17, 2018 · PreprintMicrobiology

HBV vaccination and PMTCT as elimination tools in the presence of HIV: insights from a clinical cohort and dynamic model

A. McNaughton, J. Lourenco, L. Hattingh, E. Adland, S. Daniels, A. van Zyl, C. S. Akiror, S. Wareing, K. Jeffery, A. Ansari, P. Klenerman, P. Goulder, S. Gupta, P. Jooste, P. C. Matthews

This study evaluates HBV vaccination and PMTCT as tools for elimination in HIV-coinfected populations using a clinical cohort and dynamic model, showing potential for significant public health impact by 2030.

bioRxiv · Sep 24, 2018Microbiology

Retrosplenial cortex and its role in spatial cognition

A. S. Mitchell, R. Czajkowski, N. Zhang, K. Jeffery, A. Nelson

This paper reviews the role of retrosplenial cortex in spatial cognition, classifying proposed functions into three categories and suggesting ways to test them.

bioRxiv · Sep 19, 2017Animal Behavior & Cognition