Author

S. Pradeep

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Bioengineering· 2 Cancer Biology· 2 Cell Biology· 2

Signature Assays, Organisms & Methods

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Approach:experimental assay· 5 Research Focus:cell type annotation· 4 Organism:human· 3 Assay:imaging· 3 Research Focus:cell signaling & trafficking· 2 Research Focus:clustering· 2 Research Focus:differential expression· 2 Assay:proteomics· 2

Frequent Co-Authors

T. A. Zangle· 3 shared C. Liu· 2 shared I. E. Ivanov· 2 shared M. D. Leonetti· 2 shared S. B. Mehta· 2 shared A. Geethadevi· 1 shared A. H. McMorrow· 1 shared A. L. Welm· 1 shared

Activity by Year

2020-2023 · peak 3/yr

Co-Author Collaboration Network

10 top collaborators · 20 mutual co-author links

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3 shared papersBioengineering

T. A. Zangle

Mutual co-authors in cluster

Author profile →

6 papers

Recent·Most cited

Mantis: high-throughput 4D imaging and analysis of the molecular and physical architecture of cells

I. E. Ivanov, E. Hirata-Miyasaki, T. Chandler, R. C. Kovilakam, Z. Liu, S. Pradeep, C. Liu, M. Bhave, S. Khadka, C. Arias, M. D. Leonetti, B. Huang, S. B. Mehta

The paper introduces Mantis, a high-throughput 4D microscope, and shrimPy, software for analyzing 4D data, to study cellular dynamics and responses to perturbations like viral infection.

bioRxiv · Dec 19, 2023Cell Biology

Global organelle profiling reveals subcellular localization and remodeling at proteome scale

M. Y. Hein, D. Peng, V. Todorova, F. McCarthy, K. Kim, C. Liu, L. Savy, C. Januel, R. Baltazar-Nunez, S. Bax, S. Vaid, M. Vangipuram, I. E. Ivanov, J. R. Byrum, S. Pradeep, , M. D. Leonetti

The paper maps subcellular localization of human proteins and shows proteome remodeling during viral infection by combining organelle immuno-capture with mass spectrometry.

bioRxiv · Dec 18, 2023Cell Biology

LVING Reveals the Intracellular Structure of Cell Growth

S. Pradeep, T. A. Zangle

LVING quantifies intracellular growth and degradation by measuring cell mass and transport velocity, revealing structural changes in cell states and drug effects.

bioRxiv · Sep 8, 2023Bioengineering

Laterally transferred macrophage mitochondria acts as a signaling source promoting cancer cell proliferation

C. U. Kidwell, J. R. Casalini, S. Pradeep, S. D. Scherer, D. Greiner, J. S. Johnson, G. S. Olson, J. Rutter, A. L. Welm, T. A. Zangle, M. Roh-Johnson

The paper shows that dysfunctional macrophage mitochondria transferred to cancer cells promote proliferation via ROS-induced ERK signaling.

bioRxiv · Aug 10, 2021Cancer Biology

Quantitative Phase Velocimetry for Label-Free Measurement of Intracellular Mass Transport Velocity

S. Pradeep, T. A. Zangle

This paper introduces quantitative phase velocimetry (QPV) to measure intracellular mass transport velocity without labels, enabling comparison of nuclear and cytoplasmic diffusivity.

bioRxiv · Aug 4, 2021Bioengineering

RNA-binding protein FXR1 drives cMYC translation by mRNA circularization through eIF4F recruitment in ovarian cancer

J. George, Y. Li, D. Parashar, S.-W. Tsaih, P. Gupta, A. Geethadevi, I. Kadembari, C. Ghosh, Y. Sun, R. Ramchandran, J. S. Rader, H. Rui, M. Dey, S. Pradeep, P. Chaluvally-Raghavan

This study identifies FXR1 as a driver of cMYC translation through mRNA circularization and eIF4F recruitment in ovarian cancer, linking FXR1 amplification to poor prognosis.

bioRxiv · Jul 19, 2020 · PreprintCancer Biology