Author

D. L. Farber

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Signature Assays, Organisms & Methods

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Research Focus:cell type annotation· 4 Research Focus:differential expression· 3 Organism:human· 3 Approach:deep learning· 2 Approach:experimental assay· 2 Assay:flow cytometry· 2 Assay:bulk RNA-seq· 1 Research Focus:cell signaling & trafficking· 1

Frequent Co-Authors

P. A. Sims· 2 shared A. J. Yates· 1 shared A. R. Maceiras· 1 shared A. Wagner· 1 shared A. Wilk· 1 shared B. Hu· 1 shared C. Dominguez-Conde· 1 shared C. Ergen· 1 shared

Activity by Year

2019-2025 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 17 mutual co-author links

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2 shared papersImmunology

P. A. Sims

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Author profile →

4 papers

Recent·Most cited

Multimodal profiling reveals tissue-directed signatures of human immune cells altered with age

S. B. Wells, D. Rainbow, M. Mark, P. P. A. S. Szabo, C. Ergen, A. R. Maceiras, D. P. Caron, E. Rahmani, E. Benuck, V. V. P. Amiri, D. Chen, A. Wagner, S. K. Howlett, L. B. Jarvis, K. L. Elli, , N. Yosef

The paper profiles immune cell RNA and protein expression across tissues and age to identify tissue-specific and age-related immune signatures.

Nature Immunology · Aug 13, 2025Peer-reviewedImmunology

A variational deep-learning approach to modeling memory T cell dynamics

C. H. van Dorp, J. I. Gray, D. H. Paik, D. L. Farber, A. J. Yates

The paper develops a variational deep-learning method to model memory T cell dynamics in mice, revealing phenotypic diversity and long-term heterogeneity in lung-resident TRM cells.

bioRxiv · Jul 8, 2024Immunology

Influence of age on functional memory T cell diversity

F. Fang, W. Cao, W. Zhu, N. Lam, L. Li, S. Gaddam, Y. Wang, C. Kim, S. Lambert, H. Zhang, B. Hu, D. L. Farber, C. M. Weyand, J. J. Goronzy

The paper identifies CD73-expressing memory T cells that decline with age and are functionally distinct, with potential interventions to improve immune memory in older adults.

bioRxiv · May 29, 2021 · PreprintImmunology

A single-cell reference map for human blood and tissue T cell activation reveals functional states in health and disease

P. A. Szabo, H. M. Levitin, M. Miron, M. E. Snyder, T. Senda, J. Yuan, Y. L. Cheng, E. C. Bush, P. Dogra, P. Thapa, D. L. Farber, P. A. Sims

bioRxiv · Feb 20, 2019 · PreprintImmunology